{
 "cells": [
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "# DNA_construct Examples\n",
    "\n",
    "DNA_construct is a flexible way to indicate a DNA sequence.\n",
    "\n",
    "A DNA sequence is composed of a string of nucleotides. The sequence of these nucleotides can allow binding of other biomolecules such as proteins or RNA. We choose to annotate known binding interactions and other features of DNA sequences by considering them to be \"DNA parts\". a \"part\" has a certain function, and the order and orientation of parts on a dna sequence describes the overall function of that DNA sequence.\n",
    "\n",
    "For example, a `Promoter` is a part which binds to RNA polymerase and causes everything downstream to be transcribed into RNA. A `Terminator`, then, is a sequence which stops the transcription of DNA into RNA. Therefore, anything between a `Promoter` and a `Terminator` gets turned into RNA.\n",
    "\n",
    "Other parts such as a Ribosome Binding Site or `RBS`, binds to the ribosome, but only if it is made of RNA and not DNA. Thus, an `RBS` is _like_ a `Promoter`, but instead of RNA it makes Protein. As always the position and orientation of parts determines what those parts actually do. If your sequence contains a Coding Sequence (`CDS`) _before_ an `RBS`, then the ribosome actually cannot translate that protein. Likewise if your `RBS` is after a `Terminator`, that `RBS` never gets turned into RNA.\n",
    "\n",
    "This type of logic is incorporated into `DNA_construct`."
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "The basic workflow is to first define a list of parts, then string them together into a `DNA_construct`"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {
    "tags": []
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "imports done!\n",
      "enumerating components\n",
      "\n",
      "[ptet_0, RNA_construct = UTR1_GFP_t16]\n",
      "\n",
      "CRN species\n",
      "dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "protein[RNAP]\n",
      "protein[Ribo]\n",
      "protein[RNAase]\n",
      "rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "protein[tetr]\n",
      "ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "protein[Ribosome]\n",
      "ordered_polymer[complex[part[UTR1]:protein[Ribosome]-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "protein[GFP]\n",
      "complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]]\n",
      "\n",
      "CRN reactions\n",
      "dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      " Kf=k_forward * dna_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\n",
      " Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\n",
      "  k_forward=100\n",
      "  found_key=(mech=None, partid=None, name=kb).\n",
      "  search_key=(mech=transcription_mm, partid=ptet_leak, name=kb).\n",
      "  k_reverse=10\n",
      "  found_key=(mech=None, partid=None, name=ku).\n",
      "  search_key=(mech=transcription_mm, partid=ptet_leak, name=ku).\n",
      "\n",
      "ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\n",
      " Kf=k_forward * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\n",
      "  k_forward=0.05\n",
      "  found_key=(mech=None, partid=None, name=ktx).\n",
      "  search_key=(mech=transcription_mm, partid=ptet_leak, name=ktx).\n",
      "\n",
      "2protein[tetr]+dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      " Kf=k_forward * protein_tetr^2 * dna_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_\n",
      " Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\n",
      "  k_forward=100\n",
      "  found_key=(mech=None, partid=None, name=kb).\n",
      "  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=kb).\n",
      "  k_reverse=10\n",
      "  found_key=(mech=None, partid=None, name=ku).\n",
      "  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=ku).\n",
      "\n",
      "ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      " Kf=k_forward * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\n",
      " Kr=k_reverse * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\n",
      "  k_forward=100\n",
      "  found_key=(mech=None, partid=None, name=kb).\n",
      "  search_key=(mech=transcription_mm, partid=ptet_tetr, name=kb).\n",
      "  k_reverse=10\n",
      "  found_key=(mech=None, partid=None, name=ku).\n",
      "  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ku).\n",
      "\n",
      "ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\n",
      " Kf=k_forward * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\n",
      "  k_forward=0.05\n",
      "  found_key=(mech=None, partid=None, name=ktx).\n",
      "  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ktx).\n",
      "\n",
      "rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[Ribosome] <--> ordered_polymer[complex[part[UTR1]:protein[Ribosome]-forward]:part[GFP-forward]:part[t16-forward]]\n",
      " Kf=k_forward * rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_Ribosome\n",
      " Kr=k_reverse * ordered_polymer_complex_part_UTR1_protein_Ribosome_forward__part_GFP_forward_part_t16_forward_\n",
      "  k_forward=100\n",
      "  found_key=(mech=None, partid=None, name=kb).\n",
      "  search_key=(mech=translation_mm, partid=UTR1, name=kb).\n",
      "  k_reverse=10\n",
      "  found_key=(mech=None, partid=None, name=ku).\n",
      "  search_key=(mech=translation_mm, partid=UTR1, name=ku).\n",
      "\n",
      "ordered_polymer[complex[part[UTR1]:protein[Ribosome]-forward]:part[GFP-forward]:part[t16-forward]] --> rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[GFP]+protein[Ribosome]\n",
      " Kf=k_forward * ordered_polymer_complex_part_UTR1_protein_Ribosome_forward__part_GFP_forward_part_t16_forward_\n",
      "  k_forward=0.2\n",
      "  found_key=(mech=None, partid=None, name=ktl).\n",
      "  search_key=(mech=translation_mm, partid=UTR1, name=ktl).\n",
      "\n",
      "rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]]\n",
      " Kf=k_forward * rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAase\n",
      " Kr=k_reverse * complex_protein_RNAase_rna_part_UTR1_forward_part_GFP_forward_part_t16_forward__\n",
      "  k_forward=100\n",
      "  found_key=(mech=None, partid=None, name=kb).\n",
      "  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kb).\n",
      "  k_reverse=10\n",
      "  found_key=(mech=None, partid=None, name=ku).\n",
      "  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=ku).\n",
      "\n",
      "complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]] --> protein[RNAase]\n",
      " Kf=k_forward * complex_protein_RNAase_rna_part_UTR1_forward_part_GFP_forward_part_t16_forward__\n",
      "  k_forward=2\n",
      "  found_key=(mech=None, partid=None, name=kdeg).\n",
      "  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kdeg).\n",
      "\n"
     ]
    }
   ],
   "source": [
    "from biocrnpyler.core import Species\n",
    "from biocrnpyler.components import RegulatedPromoter, Promoter, RBS, CDS, Terminator, DNA_construct\n",
    "from biocrnpyler.mechanisms import Transcription_MM, Translation_MM, One_Step_Cooperative_Binding\n",
    "from biocrnpyler.mixtures import TxTlExtract\n",
    "from biocrnpyler.utils.plotting import render_network_bokeh \n",
    "try:\n",
    "    #dnaplotlib is a cool library for plotting DNAs.\n",
    "    #please use my fork located at https://github.com/dr3y/dnaplotlib\n",
    "    #to install it type: pip install git+git://github.com/dr3y/dnaplotlib.git@master\n",
    "    import dnaplotlib as dpl # type: ignore\n",
    "    %matplotlib inline\n",
    "    dpl_enabled = True\n",
    "except (ModuleNotFoundError,ImportError) as e:\n",
    "    dpl_enabled = False\n",
    "print(\"imports done!\")\n",
    "\n",
    "def plotNetwork(inCRN,use_pretty_print=True,colordict = None,iterations=2000,rseed=30,posscale=1,export=False,colordict_append=None):\n",
    "    try:\n",
    "        from bokeh.models import (Plot , Range1d) # type: ignore\n",
    "\n",
    "        import bokeh.plotting # type: ignore\n",
    "        import bokeh.io # type: ignore\n",
    "        bokeh.io.output_notebook() #this makes the graph appear in line with the notebook\n",
    "        if(colordict is None):\n",
    "            colordict={\"complex\":\"cyan\",\"protein\":\"green\",\n",
    "                        \"GFP\":\"lightgreen\",\n",
    "                        \"RFP\":\"red\",\n",
    "                        \"ribosome\":\"blue\",\n",
    "                        \"dna\":\"white\",\"rna\":\"orange\",\n",
    "                        \"ligand\":\"pink\",\"phosphate\":\"yellow\",\"nothing\":\"purple\"}\n",
    "        if(colordict_append is not None):\n",
    "            colordict.update(colordict_append)\n",
    "        #now you draw the network on the plot. Layout \"force\" is \n",
    "        plot = render_network_bokeh(inCRN,use_pretty_print=use_pretty_print,colordict=colordict,layout=\"force\",iterations=iterations,rseed=rseed,posscale=posscale)\n",
    "        bokeh.io.show(plot) #if you don't type this the plot won't show\n",
    "        if(export):\n",
    "            plot.output_backend = \"svg\"\n",
    "            bokeh.io.export_svgs(plot, \"plot_file.svg\")\n",
    "            \n",
    "    except ModuleNotFoundError:\n",
    "        return None\n",
    "\n",
    "\n",
    "\n",
    "\n",
    "ptet = RegulatedPromoter(\"ptet\",[\"tetr\"],leak=True) #this is a repressible promoter\n",
    "pconst = Promoter(\"pconst\") #constitutive promoter\n",
    "utr1 = RBS(\"UTR1\") #regular RBS\n",
    "gfp = CDS(\"GFP\",\"GFP\")\n",
    "rfp = CDS(\"RFP\",\"RFP\")\n",
    "t16 = Terminator(\"t16\") #a terminator stops transcription\n",
    "\n",
    "\n",
    "#now that the parts are defined, we can put together our construct.\n",
    "parameters={\"cooperativity\":2,\"kb\":100, \"ku\":10, \"ktx\":.05, \"ktl\":.2, \"kdeg\":2,\"kint\":.05}\n",
    "\n",
    "construct_1 = DNA_construct([[ptet,\"forward\"],[utr1,\"forward\"],[gfp,\"forward\"],[t16,\"forward\"]],\\\n",
    "                                mechanisms = {\"transcription\":Transcription_MM(Species(\"RNAP\",material_type=\"protein\")),\\\n",
    "                                    \"translation\":Translation_MM(Species(\"Ribosome\",material_type=\"protein\")),\\\n",
    "                                        \"binding\":One_Step_Cooperative_Binding()},parameters=parameters) \n",
    "''\n",
    "#some very basic parameters are defined\n",
    "parameters={\"cooperativity\":2,\"kb\":100, \"ku\":10, \"ktx\":.05, \"ktl\":.2, \"kdeg\":2,\"kint\":.05}\n",
    "\n",
    "components = [construct_1]\n",
    "myMixture = TxTlExtract(name = \"txtl\", parameters = parameters, components = components)\n",
    "myCRN = myMixture.compile_crn()\n",
    "print(\"enumerating components\")\n",
    "comps = myMixture.get_component(construct_1).enumerate_components()\n",
    "\n",
    "w = construct_1.enumerate_components()\n",
    "print()\n",
    "print(w)\n",
    "\n",
    "x = myCRN.species\n",
    "print()\n",
    "print(\"CRN species\")\n",
    "print('\\n'.join([a.pretty_print() for a in x]))\n",
    "\n",
    "y = myCRN.reactions\n",
    "print()\n",
    "print(\"CRN reactions\")\n",
    "print('\\n'.join([a.pretty_print() for a in y]))\n",
    "#'''\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {
    "scrolled": true,
    "tags": []
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "imports done!\n",
      "enumerating components\n",
      "\n",
      "CRN species\n",
      "dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]\n",
      "protein[RNAP]\n",
      "protein[Ribo]\n",
      "protein[RNAase]\n",
      "rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "protein[tetr]\n",
      "ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\n",
      "ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\n",
      "ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "protein[GFP]\n",
      "ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]]\n",
      "protein[RFP]\n",
      "complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]]\n",
      "complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]]\n",
      "\n",
      "CRN reactions\n",
      "dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\n",
      "2protein[tetr]+dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\n",
      "dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\n",
      "ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\n",
      "rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]]\n",
      "ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]] --> rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[GFP]+protein[Ribo]\n",
      "rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]]\n",
      "ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]] --> rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RFP]+protein[Ribo]\n",
      "rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]]\n",
      "complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]] --> protein[RNAase]\n",
      "rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]]\n",
      "complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]] --> protein[RNAase]\n"
     ]
    }
   ],
   "source": [
    "from biocrnpyler.components import CombinatorialPromoter\n",
    "from biocrnpyler.utils.plotting import render_constructs\n",
    "try:\n",
    "    #dnaplotlib is a cool library for plotting DNAs.\n",
    "    #please use my fork located at https://github.com/dr3y/dnaplotlib\n",
    "    #to install it type: pip install git+git://github.com/dr3y/dnaplotlib.git@master\n",
    "    import dnaplotlib as dpl # type: ignore\n",
    "    dpl_enabled = True\n",
    "except (ModuleNotFoundError,ImportError) as e:\n",
    "    dpl_enabled = False\n",
    "\n",
    "print(\"imports done!\")\n",
    "\n",
    "#part definitions below\n",
    "\n",
    "ptet = RegulatedPromoter(\"ptet\",[\"tetr\"],leak=True) #this is a repressible promoter\n",
    "pconst = Promoter(\"pconst\") #constitutive promoter\n",
    "pcomb = CombinatorialPromoter(\"pcomb\",[\"arac\",\"laci\"], leak=False,\n",
    "                              tx_capable_list = [[\"arac\"], [\"laci\"]]) #the Combinations A and B or just A or just B be transcribed\n",
    "utr1 = RBS(\"UTR1\") #regular RBS\n",
    "utr2 = RBS(\"UTR1\") #regular RBS\n",
    "gfp = CDS(\"GFP\") #a CDS has a name and a protein name. so this one is called GFP and the protein is also called GFP\n",
    "fusrfp = CDS(\"fusRFP\",\"RFP\",no_stop_codons=[\"forward\"]) #you can say that a protein has no stop codon. This is a little different from a fusion protein, because in this case you are saying that the ribosome reads through two proteins but still produces two distinct proteins, rather than one fused protein. This can happen in the case of the ta peptide which causes a peptide bond not to be formed while making a protein.\n",
    "rfp = CDS(\"RFP\") #regular RFP\n",
    "cfp = CDS(\"CFP\") #cfp\n",
    "t16 = Terminator(\"t16\") #a terminator stops transcription\n",
    "\n",
    "\n",
    "#now that the parts are defined, we can put together our construct.\n",
    "construct_1 = DNA_construct([[ptet,\"forward\"],[utr1,\"forward\"],[gfp,\"forward\"],[t16,\"forward\"]])\n",
    "construct_2 = DNA_construct([[t16,\"reverse\"],[rfp,\"reverse\"],[utr1,\"reverse\"],[pconst,\"reverse\"]])\n",
    "\n",
    "#now, we are using dnaplotlib to plot the constructs\n",
    "\n",
    "\n",
    "if(dpl_enabled):\n",
    "    cdict = {\"GFP\":\"green\",\"RFP\":\"red\",\"pconst\":\"black\",\"Terminator\":\"black\"}\n",
    "    render_constructs([construct_1,construct_2],color_dictionary=cdict)\n",
    "#some very basic parameters are defined\n",
    "parameters={\"cooperativity\":2,\"kb\":100, \"ku\":10, \"ktx\":.05, \"ktl\":.2, \"kdeg\":2,\"kint\":.05}\n",
    "\n",
    "components = [construct_1,construct_2]\n",
    "myMixture = TxTlExtract(name = \"txtl\", parameters = parameters, components = components)\n",
    "\n",
    "print(\"enumerating components\")\n",
    "#comps = myMixture.get_component(construct_1).enumerate_components()\n",
    "\n",
    "myCRN = myMixture.compile_crn()\n",
    "\n",
    "x = myCRN.species\n",
    "print()\n",
    "print(\"CRN species\")\n",
    "print('\\n'.join([a.pretty_print() for a in x]))\n",
    "\n",
    "y = myCRN.reactions\n",
    "print()\n",
    "print(\"CRN reactions\")\n",
    "print('\\n'.join([str(a) for a in y]))"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "You can see that for the first construct, your DNA is given an automatic name: `ptet_f_UTR1_f_GFP_f_t16_f`. \n",
    "\n",
    "The RNA made from your DNA is also given an automatic name: `UTR1_f_GFP_f_t16_f`\n",
    "\n",
    "Likewise for the second construct, which I've made in reverse to make the difference more apparent. Though you'll see that the RNA from the second construct is still produced in the right orientation, so the RNA is shown in the forwards direction.\n",
    "\n",
    "This is because DNA and RNA are now represented as an OrderedPolymer. Each member of the OrderedPolymer represents a part. So, in the case of promoters or RBSes, you'll see ribosomes and polymerases bind directly to the part inside the OrderedPolymer."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "metadata": {
    "tags": []
   },
   "outputs": [
    {
     "data": {
      "text/html": [
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       "            display: block;\n",
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       "        }\n",
       "    </style>\n",
       "    <div>\n",
       "        <a href=\"https://bokeh.org\" target=\"_blank\" class=\"bk-notebook-logo\"></a>\n",
       "        <span id=\"fc663332-5531-4f38-adbe-c75bae222044\">Loading BokehJS ...</span>\n",
       "    </div>\n"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "'use strict';\n",
       "(function(root) {\n",
       "  function now() {\n",
       "    return new Date();\n",
       "  }\n",
       "\n",
       "  const force = true;\n",
       "\n",
       "  if (typeof root._bokeh_onload_callbacks === \"undefined\" || force === true) {\n",
       "    root._bokeh_onload_callbacks = [];\n",
       "    root._bokeh_is_loading = undefined;\n",
       "  }\n",
       "\n",
       "const JS_MIME_TYPE = 'application/javascript';\n",
       "  const HTML_MIME_TYPE = 'text/html';\n",
       "  const EXEC_MIME_TYPE = 'application/vnd.bokehjs_exec.v0+json';\n",
       "  const CLASS_NAME = 'output_bokeh rendered_html';\n",
       "\n",
       "  /**\n",
       "   * Render data to the DOM node\n",
       "   */\n",
       "  function render(props, node) {\n",
       "    const script = document.createElement(\"script\");\n",
       "    node.appendChild(script);\n",
       "  }\n",
       "\n",
       "  /**\n",
       "   * Handle when an output is cleared or removed\n",
       "   */\n",
       "  function handleClearOutput(event, handle) {\n",
       "    function drop(id) {\n",
       "      const view = Bokeh.index.get_by_id(id)\n",
       "      if (view != null) {\n",
       "        view.model.document.clear()\n",
       "        Bokeh.index.delete(view)\n",
       "      }\n",
       "    }\n",
       "\n",
       "    const cell = handle.cell;\n",
       "\n",
       "    const id = cell.output_area._bokeh_element_id;\n",
       "    const server_id = cell.output_area._bokeh_server_id;\n",
       "\n",
       "    // Clean up Bokeh references\n",
       "    if (id != null) {\n",
       "      drop(id)\n",
       "    }\n",
       "\n",
       "    if (server_id !== undefined) {\n",
       "      // Clean up Bokeh references\n",
       "      const cmd_clean = \"from bokeh.io.state import curstate; print(curstate().uuid_to_server['\" + server_id + \"'].get_sessions()[0].document.roots[0]._id)\";\n",
       "      cell.notebook.kernel.execute(cmd_clean, {\n",
       "        iopub: {\n",
       "          output: function(msg) {\n",
       "            const id = msg.content.text.trim()\n",
       "            drop(id)\n",
       "          }\n",
       "        }\n",
       "      });\n",
       "      // Destroy server and session\n",
       "      const cmd_destroy = \"import bokeh.io.notebook as ion; ion.destroy_server('\" + server_id + \"')\";\n",
       "      cell.notebook.kernel.execute(cmd_destroy);\n",
       "    }\n",
       "  }\n",
       "\n",
       "  /**\n",
       "   * Handle when a new output is added\n",
       "   */\n",
       "  function handleAddOutput(event, handle) {\n",
       "    const output_area = handle.output_area;\n",
       "    const output = handle.output;\n",
       "\n",
       "    // limit handleAddOutput to display_data with EXEC_MIME_TYPE content only\n",
       "    if ((output.output_type != \"display_data\") || (!Object.prototype.hasOwnProperty.call(output.data, EXEC_MIME_TYPE))) {\n",
       "      return\n",
       "    }\n",
       "\n",
       "    const toinsert = output_area.element.find(\".\" + CLASS_NAME.split(' ')[0]);\n",
       "\n",
       "    if (output.metadata[EXEC_MIME_TYPE][\"id\"] !== undefined) {\n",
       "      toinsert[toinsert.length - 1].firstChild.textContent = output.data[JS_MIME_TYPE];\n",
       "      // store reference to embed id on output_area\n",
       "      output_area._bokeh_element_id = output.metadata[EXEC_MIME_TYPE][\"id\"];\n",
       "    }\n",
       "    if (output.metadata[EXEC_MIME_TYPE][\"server_id\"] !== undefined) {\n",
       "      const bk_div = document.createElement(\"div\");\n",
       "      bk_div.innerHTML = output.data[HTML_MIME_TYPE];\n",
       "      const script_attrs = bk_div.children[0].attributes;\n",
       "      for (let i = 0; i < script_attrs.length; i++) {\n",
       "        toinsert[toinsert.length - 1].firstChild.setAttribute(script_attrs[i].name, script_attrs[i].value);\n",
       "        toinsert[toinsert.length - 1].firstChild.textContent = bk_div.children[0].textContent\n",
       "      }\n",
       "      // store reference to server id on output_area\n",
       "      output_area._bokeh_server_id = output.metadata[EXEC_MIME_TYPE][\"server_id\"];\n",
       "    }\n",
       "  }\n",
       "\n",
       "  function register_renderer(events, OutputArea) {\n",
       "\n",
       "    function append_mime(data, metadata, element) {\n",
       "      // create a DOM node to render to\n",
       "      const toinsert = this.create_output_subarea(\n",
       "        metadata,\n",
       "        CLASS_NAME,\n",
       "        EXEC_MIME_TYPE\n",
       "      );\n",
       "      this.keyboard_manager.register_events(toinsert);\n",
       "      // Render to node\n",
       "      const props = {data: data, metadata: metadata[EXEC_MIME_TYPE]};\n",
       "      render(props, toinsert[toinsert.length - 1]);\n",
       "      element.append(toinsert);\n",
       "      return toinsert\n",
       "    }\n",
       "\n",
       "    /* Handle when an output is cleared or removed */\n",
       "    events.on('clear_output.CodeCell', handleClearOutput);\n",
       "    events.on('delete.Cell', handleClearOutput);\n",
       "\n",
       "    /* Handle when a new output is added */\n",
       "    events.on('output_added.OutputArea', handleAddOutput);\n",
       "\n",
       "    /**\n",
       "     * Register the mime type and append_mime function with output_area\n",
       "     */\n",
       "    OutputArea.prototype.register_mime_type(EXEC_MIME_TYPE, append_mime, {\n",
       "      /* Is output safe? */\n",
       "      safe: true,\n",
       "      /* Index of renderer in `output_area.display_order` */\n",
       "      index: 0\n",
       "    });\n",
       "  }\n",
       "\n",
       "  // register the mime type if in Jupyter Notebook environment and previously unregistered\n",
       "  if (root.Jupyter !== undefined) {\n",
       "    const events = require('base/js/events');\n",
       "    const OutputArea = require('notebook/js/outputarea').OutputArea;\n",
       "\n",
       "    if (OutputArea.prototype.mime_types().indexOf(EXEC_MIME_TYPE) == -1) {\n",
       "      register_renderer(events, OutputArea);\n",
       "    }\n",
       "  }\n",
       "  if (typeof (root._bokeh_timeout) === \"undefined\" || force === true) {\n",
       "    root._bokeh_timeout = Date.now() + 5000;\n",
       "    root._bokeh_failed_load = false;\n",
       "  }\n",
       "\n",
       "  const NB_LOAD_WARNING = {'data': {'text/html':\n",
       "     \"<div style='background-color: #fdd'>\\n\"+\n",
       "     \"<p>\\n\"+\n",
       "     \"BokehJS does not appear to have successfully loaded. If loading BokehJS from CDN, this \\n\"+\n",
       "     \"may be due to a slow or bad network connection. Possible fixes:\\n\"+\n",
       "     \"</p>\\n\"+\n",
       "     \"<ul>\\n\"+\n",
       "     \"<li>re-rerun `output_notebook()` to attempt to load from CDN again, or</li>\\n\"+\n",
       "     \"<li>use INLINE resources instead, as so:</li>\\n\"+\n",
       "     \"</ul>\\n\"+\n",
       "     \"<code>\\n\"+\n",
       "     \"from bokeh.resources import INLINE\\n\"+\n",
       "     \"output_notebook(resources=INLINE)\\n\"+\n",
       "     \"</code>\\n\"+\n",
       "     \"</div>\"}};\n",
       "\n",
       "  function display_loaded(error = null) {\n",
       "    const el = document.getElementById(\"fc663332-5531-4f38-adbe-c75bae222044\");\n",
       "    if (el != null) {\n",
       "      const html = (() => {\n",
       "        if (typeof root.Bokeh === \"undefined\") {\n",
       "          if (error == null) {\n",
       "            return \"BokehJS is loading ...\";\n",
       "          } else {\n",
       "            return \"BokehJS failed to load.\";\n",
       "          }\n",
       "        } else {\n",
       "          const prefix = `BokehJS ${root.Bokeh.version}`;\n",
       "          if (error == null) {\n",
       "            return `${prefix} successfully loaded.`;\n",
       "          } else {\n",
       "            return `${prefix} <b>encountered errors</b> while loading and may not function as expected.`;\n",
       "          }\n",
       "        }\n",
       "      })();\n",
       "      el.innerHTML = html;\n",
       "\n",
       "      if (error != null) {\n",
       "        const wrapper = document.createElement(\"div\");\n",
       "        wrapper.style.overflow = \"auto\";\n",
       "        wrapper.style.height = \"5em\";\n",
       "        wrapper.style.resize = \"vertical\";\n",
       "        const content = document.createElement(\"div\");\n",
       "        content.style.fontFamily = \"monospace\";\n",
       "        content.style.whiteSpace = \"pre-wrap\";\n",
       "        content.style.backgroundColor = \"rgb(255, 221, 221)\";\n",
       "        content.textContent = error.stack ?? error.toString();\n",
       "        wrapper.append(content);\n",
       "        el.append(wrapper);\n",
       "      }\n",
       "    } else if (Date.now() < root._bokeh_timeout) {\n",
       "      setTimeout(() => display_loaded(error), 100);\n",
       "    }\n",
       "  }\n",
       "\n",
       "  function run_callbacks() {\n",
       "    try {\n",
       "      root._bokeh_onload_callbacks.forEach(function(callback) {\n",
       "        if (callback != null)\n",
       "          callback();\n",
       "      });\n",
       "    } finally {\n",
       "      delete root._bokeh_onload_callbacks\n",
       "    }\n",
       "    console.debug(\"Bokeh: all callbacks have finished\");\n",
       "  }\n",
       "\n",
       "  function load_libs(css_urls, js_urls, callback) {\n",
       "    if (css_urls == null) css_urls = [];\n",
       "    if (js_urls == null) js_urls = [];\n",
       "\n",
       "    root._bokeh_onload_callbacks.push(callback);\n",
       "    if (root._bokeh_is_loading > 0) {\n",
       "      console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n",
       "      return null;\n",
       "    }\n",
       "    if (js_urls == null || js_urls.length === 0) {\n",
       "      run_callbacks();\n",
       "      return null;\n",
       "    }\n",
       "    console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n",
       "    root._bokeh_is_loading = css_urls.length + js_urls.length;\n",
       "\n",
       "    function on_load() {\n",
       "      root._bokeh_is_loading--;\n",
       "      if (root._bokeh_is_loading === 0) {\n",
       "        console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n",
       "        run_callbacks()\n",
       "      }\n",
       "    }\n",
       "\n",
       "    function on_error(url) {\n",
       "      console.error(\"failed to load \" + url);\n",
       "    }\n",
       "\n",
       "    for (let i = 0; i < css_urls.length; i++) {\n",
       "      const url = css_urls[i];\n",
       "      const element = document.createElement(\"link\");\n",
       "      element.onload = on_load;\n",
       "      element.onerror = on_error.bind(null, url);\n",
       "      element.rel = \"stylesheet\";\n",
       "      element.type = \"text/css\";\n",
       "      element.href = url;\n",
       "      console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n",
       "      document.body.appendChild(element);\n",
       "    }\n",
       "\n",
       "    for (let i = 0; i < js_urls.length; i++) {\n",
       "      const url = js_urls[i];\n",
       "      const element = document.createElement('script');\n",
       "      element.onload = on_load;\n",
       "      element.onerror = on_error.bind(null, url);\n",
       "      element.async = false;\n",
       "      element.src = url;\n",
       "      console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n",
       "      document.head.appendChild(element);\n",
       "    }\n",
       "  };\n",
       "\n",
       "  function inject_raw_css(css) {\n",
       "    const element = document.createElement(\"style\");\n",
       "    element.appendChild(document.createTextNode(css));\n",
       "    document.body.appendChild(element);\n",
       "  }\n",
       "\n",
       "  const js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-gl-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-mathjax-3.7.3.min.js\"];\n",
       "  const css_urls = [];\n",
       "\n",
       "  const inline_js = [    function(Bokeh) {\n",
       "      Bokeh.set_log_level(\"info\");\n",
       "    },\n",
       "function(Bokeh) {\n",
       "    }\n",
       "  ];\n",
       "\n",
       "  function run_inline_js() {\n",
       "    if (root.Bokeh !== undefined || force === true) {\n",
       "      try {\n",
       "            for (let i = 0; i < inline_js.length; i++) {\n",
       "      inline_js[i].call(root, root.Bokeh);\n",
       "    }\n",
       "\n",
       "      } catch (error) {display_loaded(error);throw error;\n",
       "      }if (force === true) {\n",
       "        display_loaded();\n",
       "      }} else if (Date.now() < root._bokeh_timeout) {\n",
       "      setTimeout(run_inline_js, 100);\n",
       "    } else if (!root._bokeh_failed_load) {\n",
       "      console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n",
       "      root._bokeh_failed_load = true;\n",
       "    } else if (force !== true) {\n",
       "      const cell = $(document.getElementById(\"fc663332-5531-4f38-adbe-c75bae222044\")).parents('.cell').data().cell;\n",
       "      cell.output_area.append_execute_result(NB_LOAD_WARNING)\n",
       "    }\n",
       "  }\n",
       "\n",
       "  if (root._bokeh_is_loading === 0) {\n",
       "    console.debug(\"Bokeh: BokehJS loaded, going straight to plotting\");\n",
       "    run_inline_js();\n",
       "  } else {\n",
       "    load_libs(css_urls, js_urls, function() {\n",
       "      console.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n",
       "      run_inline_js();\n",
       "    });\n",
       "  }\n",
       "}(window));"
      ],
      "application/vnd.bokehjs_load.v0+json": "'use strict';\n(function(root) {\n  function now() {\n    return new Date();\n  }\n\n  const force = true;\n\n  if (typeof root._bokeh_onload_callbacks === \"undefined\" || force === true) {\n    root._bokeh_onload_callbacks = [];\n    root._bokeh_is_loading = undefined;\n  }\n\n\n  if (typeof (root._bokeh_timeout) === \"undefined\" || force === true) {\n    root._bokeh_timeout = Date.now() + 5000;\n    root._bokeh_failed_load = false;\n  }\n\n  const NB_LOAD_WARNING = {'data': {'text/html':\n     \"<div style='background-color: #fdd'>\\n\"+\n     \"<p>\\n\"+\n     \"BokehJS does not appear to have successfully loaded. If loading BokehJS from CDN, this \\n\"+\n     \"may be due to a slow or bad network connection. Possible fixes:\\n\"+\n     \"</p>\\n\"+\n     \"<ul>\\n\"+\n     \"<li>re-rerun `output_notebook()` to attempt to load from CDN again, or</li>\\n\"+\n     \"<li>use INLINE resources instead, as so:</li>\\n\"+\n     \"</ul>\\n\"+\n     \"<code>\\n\"+\n     \"from bokeh.resources import INLINE\\n\"+\n     \"output_notebook(resources=INLINE)\\n\"+\n     \"</code>\\n\"+\n     \"</div>\"}};\n\n  function display_loaded(error = null) {\n    const el = document.getElementById(\"fc663332-5531-4f38-adbe-c75bae222044\");\n    if (el != null) {\n      const html = (() => {\n        if (typeof root.Bokeh === \"undefined\") {\n          if (error == null) {\n            return \"BokehJS is loading ...\";\n          } else {\n            return \"BokehJS failed to load.\";\n          }\n        } else {\n          const prefix = `BokehJS ${root.Bokeh.version}`;\n          if (error == null) {\n            return `${prefix} successfully loaded.`;\n          } else {\n            return `${prefix} <b>encountered errors</b> while loading and may not function as expected.`;\n          }\n        }\n      })();\n      el.innerHTML = html;\n\n      if (error != null) {\n        const wrapper = document.createElement(\"div\");\n        wrapper.style.overflow = \"auto\";\n        wrapper.style.height = \"5em\";\n        wrapper.style.resize = \"vertical\";\n        const content = document.createElement(\"div\");\n        content.style.fontFamily = \"monospace\";\n        content.style.whiteSpace = \"pre-wrap\";\n        content.style.backgroundColor = \"rgb(255, 221, 221)\";\n        content.textContent = error.stack ?? error.toString();\n        wrapper.append(content);\n        el.append(wrapper);\n      }\n    } else if (Date.now() < root._bokeh_timeout) {\n      setTimeout(() => display_loaded(error), 100);\n    }\n  }\n\n  function run_callbacks() {\n    try {\n      root._bokeh_onload_callbacks.forEach(function(callback) {\n        if (callback != null)\n          callback();\n      });\n    } finally {\n      delete root._bokeh_onload_callbacks\n    }\n    console.debug(\"Bokeh: all callbacks have finished\");\n  }\n\n  function load_libs(css_urls, js_urls, callback) {\n    if (css_urls == null) css_urls = [];\n    if (js_urls == null) js_urls = [];\n\n    root._bokeh_onload_callbacks.push(callback);\n    if (root._bokeh_is_loading > 0) {\n      console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n      return null;\n    }\n    if (js_urls == null || js_urls.length === 0) {\n      run_callbacks();\n      return null;\n    }\n    console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n    root._bokeh_is_loading = css_urls.length + js_urls.length;\n\n    function on_load() {\n      root._bokeh_is_loading--;\n      if (root._bokeh_is_loading === 0) {\n        console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n        run_callbacks()\n      }\n    }\n\n    function on_error(url) {\n      console.error(\"failed to load \" + url);\n    }\n\n    for (let i = 0; i < css_urls.length; i++) {\n      const url = css_urls[i];\n      const element = document.createElement(\"link\");\n      element.onload = on_load;\n      element.onerror = on_error.bind(null, url);\n      element.rel = \"stylesheet\";\n      element.type = \"text/css\";\n      element.href = url;\n      console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n      document.body.appendChild(element);\n    }\n\n    for (let i = 0; i < js_urls.length; i++) {\n      const url = js_urls[i];\n      const element = document.createElement('script');\n      element.onload = on_load;\n      element.onerror = on_error.bind(null, url);\n      element.async = false;\n      element.src = url;\n      console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n      document.head.appendChild(element);\n    }\n  };\n\n  function inject_raw_css(css) {\n    const element = document.createElement(\"style\");\n    element.appendChild(document.createTextNode(css));\n    document.body.appendChild(element);\n  }\n\n  const js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-gl-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-mathjax-3.7.3.min.js\"];\n  const css_urls = [];\n\n  const inline_js = [    function(Bokeh) {\n      Bokeh.set_log_level(\"info\");\n    },\nfunction(Bokeh) {\n    }\n  ];\n\n  function run_inline_js() {\n    if (root.Bokeh !== undefined || force === true) {\n      try {\n            for (let i = 0; i < inline_js.length; i++) {\n      inline_js[i].call(root, root.Bokeh);\n    }\n\n      } catch (error) {display_loaded(error);throw error;\n      }if (force === true) {\n        display_loaded();\n      }} else if (Date.now() < root._bokeh_timeout) {\n      setTimeout(run_inline_js, 100);\n    } else if (!root._bokeh_failed_load) {\n      console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n      root._bokeh_failed_load = true;\n    } else if (force !== true) {\n      const cell = $(document.getElementById(\"fc663332-5531-4f38-adbe-c75bae222044\")).parents('.cell').data().cell;\n      cell.output_area.append_execute_result(NB_LOAD_WARNING)\n    }\n  }\n\n  if (root._bokeh_is_loading === 0) {\n    console.debug(\"Bokeh: BokehJS loaded, going straight to plotting\");\n    run_inline_js();\n  } else {\n    load_libs(css_urls, js_urls, function() {\n      console.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n      run_inline_js();\n    });\n  }\n}(window));"
     },
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    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "/Users/murray/Library/CloudStorage/Dropbox/macosx/src/biocrnpyler/biocrnpyler/utils/plotting.py:203: UserWarning: Node keys in 'layout_function' don't match node keys in the graph. These nodes may not be displayed correctly.\n",
      "  reaction_renderer = from_networkx(DGreactions, positions, center=(0, 0))\n",
      "/Users/murray/Library/CloudStorage/Dropbox/macosx/src/biocrnpyler/biocrnpyler/utils/plotting.py:204: UserWarning: Node keys in 'layout_function' don't match node keys in the graph. These nodes may not be displayed correctly.\n",
      "  species_renderer = from_networkx(DGspecies, positions, center=(0, 0))\n"
     ]
    },
    {
     "data": {
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       "\n",
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in default.]\",\"dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse] in default.]\",\"protein[RNAP in default.]\",\"protein[Ribo in default.]\",\"protein[RNAase in default.]\",\"rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"protein[tetr in default.]\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse] in default.]\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"protein[GFP in default.]\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"protein[RFP in default.]\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] in default.]\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] in default.]\",\"dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * dna_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=ktx).\\n\",\"2protein[tetr]+dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_tetr^2 * dna_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ku).\\n\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ktx).\\n\",\"dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_Ribo\\n Kr=k_reverse * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=translation_mm, partid=UTR1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ku).\\n\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]] --> rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[GFP]+protein[Ribo]\\n Kf=k_forward * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_GFP_forward_part_t16_forward_\\n  k_forward=0.2\\n  found_key=(mech=None, partid=None, name=ktl).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ktl).\\n\",\"rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_Ribo\\n Kr=k_reverse * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=translation_mm, partid=UTR1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ku).\\n\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]] --> rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RFP]+protein[Ribo]\\n Kf=k_forward * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_RFP_forward_part_t16_forward_\\n  k_forward=0.2\\n  found_key=(mech=None, partid=None, name=ktl).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ktl).\\n\",\"rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]]\\n Kf=k_forward * rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAase\\n Kr=k_reverse * complex_protein_RNAase_rna_part_UTR1_forward_part_GFP_forward_part_t16_forward__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=ku).\\n\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]] --> protein[RNAase]\\n Kf=k_forward * complex_protein_RNAase_rna_part_UTR1_forward_part_GFP_forward_part_t16_forward__\\n  k_forward=2\\n  found_key=(mech=None, partid=None, name=kdeg).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kdeg).\\n\",\"rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]]\\n Kf=k_forward * rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAase\\n Kr=k_reverse * 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<--> ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * dna_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=ktx).\\n\",\"2protein[tetr]+dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_tetr^2 * dna_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ku).\\n\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ktx).\\n\",\"dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_Ribo\\n Kr=k_reverse * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=translation_mm, partid=UTR1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ku).\\n\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]] --> rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[GFP]+protein[Ribo]\\n Kf=k_forward * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_GFP_forward_part_t16_forward_\\n  k_forward=0.2\\n  found_key=(mech=None, partid=None, name=ktl).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ktl).\\n\",\"rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_Ribo\\n Kr=k_reverse * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=translation_mm, partid=UTR1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ku).\\n\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]] --> rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RFP]+protein[Ribo]\\n Kf=k_forward * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_RFP_forward_part_t16_forward_\\n  k_forward=0.2\\n  found_key=(mech=None, partid=None, name=ktl).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ktl).\\n\",\"rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]]\\n Kf=k_forward * rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAase\\n Kr=k_reverse * complex_protein_RNAase_rna_part_UTR1_forward_part_GFP_forward_part_t16_forward__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=ku).\\n\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]] --> protein[RNAase]\\n Kf=k_forward * complex_protein_RNAase_rna_part_UTR1_forward_part_GFP_forward_part_t16_forward__\\n  k_forward=2\\n  found_key=(mech=None, partid=None, name=kdeg).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kdeg).\\n\",\"rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]]\\n Kf=k_forward * rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAase\\n Kr=k_reverse * complex_protein_RNAase_rna_part_UTR1_forward_part_RFP_forward_part_t16_forward__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=ku).\\n\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]] --> protein[RNAase]\\n Kf=k_forward * complex_protein_RNAase_rna_part_UTR1_forward_part_RFP_forward_part_t16_forward__\\n  k_forward=2\\n  found_key=(mech=None, partid=None, name=kdeg).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=kdeg).\\n\"]],[\"type\",[\"<biocrnpyler.core.propensities.MassAction object at 0x131cfe870>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131cfef90>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131cff530>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131cffd10>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131d082c0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131d08890>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131d08fb0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131d09730>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131d09df0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131d0a330>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131d0a9f0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131d0aab0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131d09dc0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131d0a9c0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x131d0b4d0>\"]],[\"k_r\",[\"10\",\"None\",\"10\",\"10\",\"None\",\"10\",\"None\",\"10\",\"None\",\"10\",\"None\",\"10\",\"None\",\"10\",\"None\"]],[\"k\",[\"100\",\"0.05\",\"100\",\"100\",\"0.05\",\"100\",\"0.05\",\"100\",\"0.2\",\"100\",\"0.2\",\"100\",\"2\",\"100\",\"2\"]],[\"index\",[19,20,21,22,23,24,25,26,27,28,29,30,31,32,33]]]}}},\"view\":{\"type\":\"object\",\"name\":\"CDSView\",\"id\":\"p1018\",\"attributes\":{\"filter\":{\"type\":\"object\",\"name\":\"AllIndices\",\"id\":\"p1019\"}}},\"glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1072\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":8},\"fill_color\":{\"type\":\"field\",\"field\":\"color\"},\"marker\":{\"type\":\"value\",\"value\":\"square\"}}},\"selection_glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1073\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":8},\"fill_color\":{\"type\":\"value\",\"value\":\"#fdae61\"},\"marker\":{\"type\":\"value\",\"value\":\"square\"}}},\"hover_glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1074\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":8},\"fill_color\":{\"type\":\"value\",\"value\":\"#abdda4\"},\"marker\":{\"type\":\"value\",\"value\":\"square\"}}}}},\"edge_renderer\":{\"type\":\"object\",\"name\":\"GlyphRenderer\",\"id\":\"p1024\",\"attributes\":{\"data_source\":{\"type\":\"object\",\"name\":\"ColumnDataSource\",\"id\":\"p1021\",\"attributes\":{\"selected\":{\"type\":\"object\",\"name\":\"Selection\",\"id\":\"p1022\",\"attributes\":{\"indices\":[],\"line_indices\":[]}},\"selection_policy\":{\"type\":\"object\",\"name\":\"UnionRenderers\",\"id\":\"p1023\"},\"data\":{\"type\":\"map\",\"entries\":[[\"start\",[]],[\"end\",[]]]}}},\"view\":{\"type\":\"object\",\"name\":\"CDSView\",\"id\":\"p1025\",\"attributes\":{\"filter\":{\"type\":\"object\",\"name\":\"AllIndices\",\"id\":\"p1026\"}}},\"glyph\":{\"type\":\"object\",\"name\":\"MultiLine\",\"id\":\"p1020\"}}},\"selection_policy\":{\"type\":\"object\",\"name\":\"NodesOnly\",\"id\":\"p1027\"},\"inspection_policy\":{\"type\":\"object\",\"name\":\"NodesOnly\",\"id\":\"p1028\"}}},{\"type\":\"object\",\"name\":\"GraphRenderer\",\"id\":\"p1030\",\"attributes\":{\"layout_provider\":{\"type\":\"object\",\"name\":\"StaticLayoutProvider\",\"id\":\"p1047\",\"attributes\":{\"graph_layout\":{\"type\":\"map\",\"entries\":[[0,[44.81391217932519,-190.26655045852243]],[1,[-54.59314817570561,28.63871278032946]],[2,[-26.422843368181308,53.32945082431456]],[3,[-47.44402050771851,36.29020062527329]],[4,[71.09683713876723,-53.59950903532093]],[5,[38.01770517931941,-39.5285148843316]],[6,[62.185525790200785,-31.96763293656576]],[7,[-70.35231036533597,46.95266023344884]],[8,[-38.35721694861597,16.40460048909588]],[9,[-48.56366680157964,7.448172164492309]],[10,[-64.190759649682,-7.251556733993807]],[11,[46.613942735375396,-60.79492461249146]],[12,[-26.2118197130074,65.9973244556826]],[13,[92.22567983270939,-34.05362905159531]],[14,[114.02111277114257,118.34851854596462]],[15,[60.45056832127524,-80.61188691507503]],[16,[51.704452602519055,128.61656084559354]],[17,[43.64056760169123,-14.860659553710944]],[18,[23.34343362821612,-52.24886121335458]],[19,[-59.33926517873566,39.01525738192273]],[20,[-79.79983659787203,53.41661733860026]],[21,[-45.186137758658326,17.31829583868106]],[22,[-57.126234985784386,6.757963594656442]],[23,[-70.50098808695466,-17.916853200025866]],[24,[-32.315712741269046,53.78397078059985]],[25,[-21.175337911350113,76.23979312301242]],[26,[76.63893119041423,-39.85932907677283]],[27,[103.76704655289907,-29.293022640523365]],[28,[60.0544111946488,-66.4702986922567]],[29,[60.63017916130634,-92.33314154537581]],[30,[47.5919952734322,-27.718190560364842]],[31,[41.64658317306537,-7.395044930107153]],[32,[34.23080493018017,-50.900752153813706]],[33,[15.861470710079585,-53.28675057069514]]]}}},\"node_renderer\":{\"type\":\"object\",\"name\":\"GlyphRenderer\",\"id\":\"p1035\",\"attributes\":{\"data_source\":{\"type\":\"object\",\"name\":\"ColumnDataSource\",\"id\":\"p1032\",\"attributes\":{\"selected\":{\"type\":\"object\",\"name\":\"Selection\",\"id\":\"p1033\",\"attributes\":{\"indices\":[],\"line_indices\":[]}},\"selection_policy\":{\"type\":\"object\",\"name\":\"UnionRenderers\",\"id\":\"p1034\"},\"data\":{\"type\":\"map\",\"entries\":[[\"species\",[\"nothing\",\"dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse] in default.]\",\"protein[RNAP in default.]\",\"protein[Ribo in default.]\",\"protein[RNAase in default.]\",\"rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"protein[tetr in default.]\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse] in default.]\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"protein[GFP in default.]\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"protein[RFP in default.]\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] in default.]\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] in default.]\"]],[\"type\",[\"nothing\",\"dna\",\"dna\",\"protein\",\"protein\",\"protein\",\"rna\",\"ordered_polymer\",\"protein\",\"ordered_polymer\",\"ordered_polymer\",\"rna\",\"ordered_polymer\",\"ordered_polymer\",\"protein\",\"ordered_polymer\",\"protein\",\"complex\",\"complex\"]],[\"image\",[\"iVBORw0KGgoAAAANSUhEUgAAADcAAABACAYAAAC+/O8/AAAABGdBTUEAALGPC/xhBQAAAAFzUkdCAK7OHOkAAAAgY0hSTQAAeiYAAICEAAD6AAAAgOgAAHUwAADqYAAAOpgAABdwnLpRPAAAAAlwSFlzAAAOxAAADsQBlSsOGwAAAAZiS0dEAP8A/wD/oL2nkwAAACV0RVh0ZGF0ZTpjcmVhdGUAMjAxOS0wNi0yOVQxMjo0Mjo1MyswODowMLVKQ5EAAAAldEVYdGRhdGU6bW9kaWZ5ADIwMTYtMDQtMjNUMDA6NDA6MjErMDg6MDD8dsOAAAAAVHRFWHRzdmc6YmFzZS11cmkAZmlsZTovLy9ob21lL2RiL3N2Z19pbmZvL3N2Zy85My8xNy85MzE3YzE3MDc3MWRkYjhkMjA1ZGI0ZDQyMDBkZTA5MS5zdmcgfPYlAAAJH0lEQVRoQ92bV2gVzxfHJ5ZEY6zR2LEm1mhiLCSiokLsqGB50DwIPojlxUIUjQjBrsResSIW7BVEUESCsUWwEhuxxxZ7L/Ob7+TsvXd3z957k7v5Q/4fOGZ298yce3Z3zs6cGcOkQvwfMHHiRBETEyPmzZtHZxRwrqyzZcsWPCAtffv2lc+ePdPny7xzFy5ckFFRUR7nIG3btpUfPnyQZfq1fPXqlWjatKn48eMHnfGSmJgoyqxzX79+1X3s27dvdMaMenKl49z79+/Fw4cPxa9fv8T9+/dFQUGBNvbz509RqVIlUb16dVG/fn0RFxcnKlSoIGJjY/W54pCcnCxycnLoyEvlypXFkSNHRGpqqnpBXWT37t1yzpw5ulOjH4SFhXn6ASe4XrVqVdmvXz+ZkZEhDx48SC35Z/bs2Wx7EFwzCNm5wsJCuXLlStmhQwcZHh7OGgxW1F2X8fHxctu2bVI9dbJgZtWqVWxdCG6qLyV2TnViuWPHDqleM9ZQqBIdHS2PHz8u//79SxalPHDgAKsLUYGFtLyUyLkTJ07oO8wZcVu6d+8ur127Jm/fvs1eh1SrVk3m5+fTr/NSbOfWrFnDGnASFTB0v0IfhKAcGRkZsD/6Cuo1btyYvYZXedeuXfTrzAQdLRHpVGcVy5cvpzPONGrUSHTq1EkkJCSIlJQUUatWLfHv3z99TTmFGyqePHkibty4oeXKlSvi5cuX+npxWbRokUhPT6cjC3AuEOpbIgcNGmS7a1Zp37693Ldvn3z+/LlUzlBt/0BPOSr37Nkj27Rpw7brJDNmzKBWeAI69/v3bzlgwAC2cUMw3EHnd4PDhw/r9jg7vpKWlkY1nAno3OTJk9nGDcH3qTRo2bIla8+QadOmkaYzfp3buHEj2zBEjTDkzp07SdNdEB2tg2FOtm7dSjV4HJ07e/asDrFco4h2Dx48IE13UYFFNmnShLVrlTp16kgVjKimHdY5FRn1kIhrsGLFiqTlPggsLVq0YO06yYgRI6i2HdY5pyEOvk25ubmk5S4Y8QwePJi1C0FkVINr9tqGDRuoFTM25969e+fYmTGGLC2mTJnC2oTAaaC+aex1jJa+f/+udXyxObd582a2gWHDhsk/f/6QlrusW7eOtQnp3bu3/PTpk9Z7+/at7NatG6uHVIMVm3MYHlkr4nU4f/48abgLPvpWe4Z07txZO+QLxrUIaFZdDM+smJxDCLZWgowaNYo03CU7O1vWrFmTtYmb7BSRBw4cyNYxEkMGJucQebhKd+7cIQ33wA/3N7NQs2nStIObwtUZO3YsaRRhco4Lw7169aKr7tK1a1ebLUOWLl1KWs7ExcXZ6uGcLx7nTp06JatUqWKrgAmp2zi9VpBghlVg2bJltrpq9iEvX75MGj7OOeUl1JSENNwBP56zAxk/fjxpBSYnJ4dtY+7cuaTh49ykSZNsipjCuMmmTZtkuXLlbHYgycnJsqCggDQD8/HjR9mwYUNbO1OnTiUNKcupEzoH+PTpUxRNREdHUyl0rl69KtQowzNp9QXpvUOHDom6devSmcCoca9o0KABHXlREVOoaZoua+fUR1Jnb62oeRWVQqdLly5C3W06MnPp0iVRr149OgoeNXCmkpfCwkLx5csXXdbOIYmqhl36hC/FuZP+QGrBCTxRpCRKQqtWrajkBc7hTQTaOWSGuXw7ssOhoIZrYujQoXRkJzMzUyQlJdFR8VEfeip5wWsPu0A7p/qeFivly5enUsnAWtmxY8foyMzo0aPFzJkz6cg98JaooKXL+t/w8HARERGhT/hivLslAa/b/Pnz6cgMAsjevXv131DgFkHgh5pz6rJ2rkaNGmxkRKApCVigQADhwJ01olmo5OXlUckL/IiKitJl7RxWWLhodevWLSoFD0IxVmA4YLgkbTrx5s0bKnnBKo/pycFTJFKtcJX9AceGDx9OR2bQf7Oyslz7vCAiYmnMivqwewJhUc9TqKkHlbyo2YBQo3c6CgwCBPoaR0ZGhkhLS6Oj0Ll7967Iz8+nIy+mdT49TlFgbYxbsVEjB9LwD4Y91rqGjBw5krTcY+3atTY7Knbo6ZCBxznQrFkzWwWM4AOxYMECWz1DSmvKlJCQYLMVGxtLV4swOde/f39bBQhSbk74WzNTEVM+fvyYNN0DuUrOnvp2kkYRJudOnz7NVnLKy9+8edNx8TEmJkZev36dNN0FySrOpuqHpFGEyTnAVapdu7Yts4vMcGJiIqsPCbavFhc8AC7VjpVYKzbn1q9fb6sIGTNmDGkUzaX69OnD6kGw8F8aIHHrtOKElKQVm3N4Ik6rmEbKwSnVDklPT9c6pQFyK5xNJJGx8cCKzTmwcOFCthGsm/kL+ejQvgv0bnLmzBnWJmTFihWkZYZ1DvumevTowTbkJAjDWFEtLTibkNTUVP26crDOAaxwYrGea9AqeC0+f/5MNd0FiWKn34FsHZ6oE47OATVlYRv1FayRuZ0hM8DiIqIgZxeCnRX+8OsccPqwG5KSkkKa7oJtVpw9Q8aNG0eazgR0LphdDEjLufX08JohpcjZMQQbb5z6mS9+nZs+fTrbuJMgCOHjDcPBRk1s1UAY379/v17V4dr1FYxVEfCCwXGTzeLFi0uc4+jYsaNo3bq16Nmzp4iPj9fzK5jBnE45rWfjmI/l5uaKixcv6o029+7do9rOTJgwQSxZsoRNDLHAOSsYYWDbES5bJZhdBr6CsSeWo7B5AMtVKEMiIiJYfSdZvXo1/brgsTmHbxUWFDgDEITmkydPsqns0hAMHI4ePUq/rnjYnMPWPs4IBNMbA7z3WCMv7hMIVvDEt2/frrdmlRSTc/7GjFlZWaRlBmNR1Tdd26KISImFfWw8CBWPc5mZmawxyKxZs0jLP5hRYEsFHA12dAO9pKQkvYSGVSA30dHy3LlzYsiQIZ4cuy/YUpidnU1HwYHEDTJTyJ4hCr548UKovqwjJdJuyLRhhQYbt5HuwzGXfQuVMMzNnHaGR0ZGitevXws1hqMzoaHuo99FEbcpp772VDSDb9OjR49ccwz8Lx3TYNjUvHlzUz/Atwz/jaSsowNKXl6ebNeuncc5bspeFjENv5AKx5qBinp0piwjxH8G5Zz6mESqhwAAAABJRU5ErkJggg==\",null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null]],[\"color\",[\"purple\",\"white\",\"white\",\"green\",\"green\",\"green\",\"orange\",\"grey\",\"green\",\"grey\",\"grey\",\"orange\",\"grey\",\"grey\",\"green\",\"grey\",\"red\",\"cyan\",\"cyan\"]],[\"index\",[0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18]]]}}},\"view\":{\"type\":\"object\",\"name\":\"CDSView\",\"id\":\"p1036\",\"attributes\":{\"filter\":{\"type\":\"object\",\"name\":\"AllIndices\",\"id\":\"p1037\"}}},\"glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1075\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":12},\"fill_color\":{\"type\":\"field\",\"field\":\"color\"}}},\"selection_glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1076\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":15},\"fill_color\":{\"type\":\"value\",\"value\":\"#fdae61\"}}},\"hover_glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1077\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":15},\"fill_color\":{\"type\":\"value\",\"value\":\"#abdda4\"}}}}},\"edge_renderer\":{\"type\":\"object\",\"name\":\"GlyphRenderer\",\"id\":\"p1042\",\"attributes\":{\"data_source\":{\"type\":\"object\",\"name\":\"ColumnDataSource\",\"id\":\"p1039\",\"attributes\":{\"selected\":{\"type\":\"object\",\"name\":\"Selection\",\"id\":\"p1040\",\"attributes\":{\"indices\":[],\"line_indices\":[]}},\"selection_policy\":{\"type\":\"object\",\"name\":\"UnionRenderers\",\"id\":\"p1041\"},\"data\":{\"type\":\"map\",\"entries\":[[\"start\",[]],[\"end\",[]]]}}},\"view\":{\"type\":\"object\",\"name\":\"CDSView\",\"id\":\"p1043\",\"attributes\":{\"filter\":{\"type\":\"object\",\"name\":\"AllIndices\",\"id\":\"p1044\"}}},\"glyph\":{\"type\":\"object\",\"name\":\"MultiLine\",\"id\":\"p1038\"}}},\"selection_policy\":{\"type\":\"object\",\"name\":\"NodesOnly\",\"id\":\"p1045\"},\"inspection_policy\":{\"type\":\"object\",\"name\":\"NodesOnly\",\"id\":\"p1046\"}}}],\"toolbar\":{\"type\":\"object\",\"name\":\"Toolbar\",\"id\":\"p1011\",\"attributes\":{\"tools\":[{\"type\":\"object\",\"name\":\"HoverTool\",\"id\":\"p1078\",\"attributes\":{\"renderers\":[{\"id\":\"p1048\"}],\"tooltips\":null}},{\"type\":\"object\",\"name\":\"HoverTool\",\"id\":\"p1079\",\"attributes\":{\"renderers\":[{\"id\":\"p1030\"}],\"tooltips\":[[\"name\",\"@species\"],[\"type\",\"@type\"]],\"attachment\":\"right\"}},{\"type\":\"object\",\"name\":\"HoverTool\",\"id\":\"p1080\",\"attributes\":{\"renderers\":[{\"id\":\"p1012\"}],\"tooltips\":[[\"reaction\",\"@species\"],[\"type\",\"@type\"],[\"k_f\",\"@k\"],[\"k_r\",\"@k_r\"]],\"attachment\":\"right\"}},{\"type\":\"object\",\"name\":\"TapTool\",\"id\":\"p1081\",\"attributes\":{\"renderers\":\"auto\"}},{\"type\":\"object\",\"name\":\"BoxSelectTool\",\"id\":\"p1082\",\"attributes\":{\"renderers\":\"auto\",\"overlay\":{\"type\":\"object\",\"name\":\"BoxAnnotation\",\"id\":\"p1083\",\"attributes\":{\"syncable\":false,\"line_color\":\"black\",\"line_alpha\":1.0,\"line_width\":2,\"line_dash\":[4,4],\"fill_color\":\"lightgrey\",\"fill_alpha\":0.5,\"level\":\"overlay\",\"visible\":false,\"left\":{\"type\":\"number\",\"value\":\"nan\"},\"right\":{\"type\":\"number\",\"value\":\"nan\"},\"top\":{\"type\":\"number\",\"value\":\"nan\"},\"bottom\":{\"type\":\"number\",\"value\":\"nan\"},\"editable\":true,\"handles\":{\"type\":\"object\",\"name\":\"BoxInteractionHandles\",\"id\":\"p1089\",\"attributes\":{\"all\":{\"type\":\"object\",\"name\":\"AreaVisuals\",\"id\":\"p1088\",\"attributes\":{\"fill_color\":\"white\",\"hover_fill_color\":\"lightgray\"}}}}}}}},{\"type\":\"object\",\"name\":\"PanTool\",\"id\":\"p1090\"},{\"type\":\"object\",\"name\":\"WheelZoomTool\",\"id\":\"p1091\",\"attributes\":{\"renderers\":\"auto\"}}]}}}}]}};\n",
       "  const render_items = [{\"docid\":\"cf25890f-c529-4f8e-a4a5-83f6b841367a\",\"roots\":{\"p1005\":\"bf2db20e-de2e-4b44-9bae-4e3bc18d9d0f\"},\"root_ids\":[\"p1005\"]}];\n",
       "  void root.Bokeh.embed.embed_items_notebook(docs_json, render_items);\n",
       "  }\n",
       "  if (root.Bokeh !== undefined) {\n",
       "    embed_document(root);\n",
       "  } else {\n",
       "    let attempts = 0;\n",
       "    const timer = setInterval(function(root) {\n",
       "      if (root.Bokeh !== undefined) {\n",
       "        clearInterval(timer);\n",
       "        embed_document(root);\n",
       "      } else {\n",
       "        attempts++;\n",
       "        if (attempts > 100) {\n",
       "          clearInterval(timer);\n",
       "          console.log(\"Bokeh: ERROR: Unable to run BokehJS code because BokehJS library is missing\");\n",
       "        }\n",
       "      }\n",
       "    }, 10, root)\n",
       "  }\n",
       "})(window);"
      ],
      "application/vnd.bokehjs_exec.v0+json": ""
     },
     "metadata": {
      "application/vnd.bokehjs_exec.v0+json": {
       "id": "p1005"
      }
     },
     "output_type": "display_data"
    },
    {
     "data": {
      "image/png": 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",
      "text/plain": [
       "<Figure size 640x480 with 1 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "#here we are plotting the network diagram and simulating the system with some basic parameters\n",
    "\n",
    "plotNetwork(myCRN,colordict_append={\"GFP\":\"green\",\"RFP\":\"red\"})\n",
    "try:\n",
    "    import numpy as np\n",
    "    import matplotlib.pyplot as plt\n",
    "    timepoints = np.linspace(0, 200, 1000)\n",
    "    x0 = {construct_1.get_species():5.0,\n",
    "        construct_2.get_species():2.0, \"protein_RNAP\":10., \"protein_Ribo\":50.}\n",
    "    Re1 = myCRN.simulate_with_bioscrape_via_sbml(timepoints, initial_condition_dict = x0)\n",
    "    if(Re1 is not None):\n",
    "        plt.plot(timepoints,Re1[\"protein_GFP\"], label = \"protein_GFP\")\n",
    "        plt.plot(timepoints,Re1[\"protein_RFP\"], label = \"protein_RFP\")\n",
    "        plt.title(\"Time trace of two DNA system\")\n",
    "        plt.xlabel(\"time\")\n",
    "        plt.ylabel(\"protein\")\n",
    "        plt.legend()\n",
    "        plt.show()\n",
    "except ModuleNotFoundError:\n",
    "    print('please install the plotting libraries: pip install biocrnpyler[all]')\n",
    "\n",
    "\n"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "That seems pretty straightforward but now let's see what happens if we put both on the same piece of DNA:"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "metadata": {
    "tags": []
   },
   "outputs": [
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "/Users/murray/Library/CloudStorage/Dropbox/macosx/src/biocrnpyler/biocrnpyler/core/chemical_reaction_network.py:512: UserWarning: Trying to set species that is not in model: protein_arac\n",
      "  m.set_species(processed)\n"
     ]
    },
    {
     "data": {
      "image/png": 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PW1tbVq1axdNPP42DgwNeXl65fuHWrFkTPz8/3nnnHZRSuLq6snnzZrZv356l7Zw5c3jmmWdo1qwZ77zzDtWqVeP27dts2rSJBQsW4OjoyIwZM9i+fTstW7Zk0qRJ1KhRg6SkJK5cucKWLVv47rvvcjwVVqNGDUaPHs0333yDmZkZnTt35sqVK0ydOhVvb29ef/31x/6dHj9+nAkTJtCnTx/8/f2xsrLir7/+4vjx47zzzjuP/XqZmZmZMX36dMaMGUPv3r0ZMWIEUVFRTJ8+nYoVK2JmlvvZ/Sf5fWVITEw0OO14+fJlNm7cyK+//kqbNm3y1XvVqlUrunfvzi+//GKw/Pfff+fWrVt8+umn2c4wHRAQwLx581i8eHGOYee7777jr7/+okuXLlSuXJmkpCT9qa/27dsbtO3QoQO1atVi586dDB48OMscSi+99BIBAQE0btwYd3d3rl69ypdffkmVKlXw9/cHoE6dOgB89dVXDB06FEtLS2rUqIGPjw8zZszgvffe4/Lly7zwwgu4uLhw+/ZtDh48iL29PdOnT8/zdyWEXI0lTE5BrsYaP368wbKMK3tmz55tsDynK192796tunTpolxdXZWlpaV66qmnVJcuXbK0y86aNWtUzZo1laWlpcGVP7ntx+nTp1WHDh2Uo6OjcnFxUX369FHXrl3LcuVQRts+ffooNzc3ZWVlpSpXrqyGDRumkpKS9G3u3LmjJk2apHx9fZWlpaVydXVVjRo1Uu+9957BVWrZSU9PV59++qmqXr26srS0VOXLl1eDBw/Ocml5fq/Gun37tho2bJiqWbOmsre3Vw4ODqpu3bpq7ty5BldZ5XQ1VuZjplTWK6qUUur7779X1apVU1ZWVqp69epqyZIlqnv37qpBgwZ5bvskv682bdooQP+wt7dXVatWVb1791Y//vijSk9Pz7LNo1djPer06dPK3Nzc4DPZo0cPZWVllesVeP3791cWFhYqPDw82/X79u1TL7/8sqpSpYqytrZWbm5uqk2bNmrTpk3Ztp82bZoC1P79+7Os++KLL1TLli1V+fLl9Z+/kSNHqitXrhi0mzJlivLy8lJmZmYKMJhmYOPGjeq5555TTk5OytraWlWpUkX17t3bYGqHnP5ecrr6LaffqTBNGqXyGPovhBBlQFRUFNWrV6dHjx7ZjoMROWvcuDEajYbg4GBjlyJEtuQ0lhCizAkPD+fjjz/mueeew83NjatXrzJ37lxiY2NL1L3TSrKYmBhOnjzJr7/+SkhICBs2bDB2SULkSMKOEKLMsba25sqVK4wbN4779+9jZ2dH8+bN+e677/SXkIvcHT58WB8WP/jgA3r06GHskoTIkZzGEkIIIYRJk0kFhRBCCGHSJOwIIYQQwqRJ2BFCCCGESZMByujuNXTr1i0cHR2znZ5fCCGEECWPUorY2Fi8vLxynRBUwg66e/h4e3sbuwwhhBBCFMD169dznblcwg7g6OgI6H5Zme8wLYQQQoiSKSYmBm9vb/33eE4k7PDwxopOTk4SdoQQQohSJq8hKDJAWQghhBAmTcKOEEIIIUyahB0hhBBCmDQZs/MY0tPTSU1NNXYZwsgsLS0xNzc3dhlCCCHyScJOPiilCA8PJyoqytiliBKiXLlyeHp6yrxMQghRCkjYyYeMoFOhQgXs7OzkC64MU0qRkJBAREQEABUrVjRyRUIIIfIiYScP6enp+qDj5uZm7HJECWBrawtAREQEFSpUkFNaQghRwskA5TxkjNGxs7MzciWiJMn4PMgYLiGEKPkk7OSTnLoSj5LPgxBClB4SdoQQQghh0iTsiGLj4+PDl19+aewyhBBClDESdsRjK2hoCQ4OZvTo0YVay88//8zzzz+Pi4sLdnZ21KhRgxEjRnDkyBF9m6CgIDQaTZbHokWLsl1fsWJF+vbtS2hoaKHWKoQQwjgk7Ai9lJSUIn19d3f3Qh3o/fbbb9OvXz/q16/Ppk2bOHXqFN9//z1+fn68++67Bm2dnJwICwszeAwaNCjL+lu3brF69WqOHj1Kt27dSE9PL7R6hRCiLEpN17LzXIRRa5CwY8Latm3LhAkTmDBhAuXKlcPNzY33338fpRSg66H56KOPGDZsGM7OzowaNQrQ9ZbUrl0ba2trfHx8+OKLLwxe8+rVq7z++uv6npAMe/fu5dlnn8XW1hZvb28mTZpEfHy8fn3mHqGM3pWXX34ZOzs7/P392bRpU772bf/+/Xz22WfMmTOHOXPm0Lp1a3x9fWnTpg3vvfceW7ZsMWiv0Wjw9PQ0eGRcQv7o+ooVK/Lcc8/xwQcfcPLkSS5evJj/X7gQQggDqelaJq4+wvClwazYf9VodUjYeUxKKRJS0ozyyAgpj2PZsmVYWFhw4MABvv76a+bOnas/fQMwe/ZsAgICCAkJYerUqYSEhNC3b1/69+/PiRMnmDZtGlOnTiUoKAiA9evXU6lSJWbMmKHvIQE4ceIEnTp1omfPnhw/fpx169axZ88eJkyYkGt906dPp2/fvhw/fpwXX3yRQYMGcf/+/Tz3a82aNTg4ODBu3Lhs1z/p1VIZQUguLRdCiIJJTdcyac0R/jgVjpW5GZVcbPPeqIjIpIKPKTE1nVr/3WqU9z49oxN2Vo93yLy9vZk7dy4ajYYaNWpw4sQJ5s6dq+/Fef7553nzzTf17QcNGkS7du2YOnUqANWrV+f06dPMnj2bYcOG4erqirm5OY6Ojnh6euq3mz17NgMHDiQwMBAAf39/vv76a9q0acP8+fOxsbHJtr5hw4YxYMAAAGbOnMk333zDwYMHeeGFF3Ldr/Pnz1O1alUsLB7+PubMmcN///tf/fObN2/i7OwMQHR0NA4ODvp1Dg4OhIeHZ/vaN27cYPbs2VSqVInq1avnWocQQois0tK1BK49yu8ndUFnwSuNeK5GBaPVIz07Jq558+YGvRwtWrTgwoUL+rEojRs3Nmh/5swZWrVqZbCsVatWBttkJyQkhKCgIBwcHPSPTp06odVqcx3oW7duXf3P9vb2ODo66m/FkJfMvTcjRozg6NGjLFiwgPj4eIOeMEdHR44ePap/7N2712DbjDBkb2+Pt7c3KSkprF+/Hisrq3zVIoQQQictXUvguqP8diIMS3MN8wc35Lmaxgs6ID07j83W0pzTMzoZ7b0Lm729vcFzpVSWEJGf02darZYxY8YwadKkLOsqV66c43aWlpYGzzUaDVqtNs/38/f3Z8+ePaSmpupfo1y5cpQrV44bN25kaW9mZka1atVyfD1HR0cOHz6MmZkZHh4eWX4vQggh8paWruX1H47x6/EHQWdQI9o97WHssiTsPC6NRvPYp5KMaf/+/Vme+/v753g/p1q1arFnzx6DZXv37qV69er6baysrLL08jRs2JBTp07lGigK04ABA/jmm2/49ttvee2115749fIKQ0IIIXKXrlVM/vEYm4/dwsJMw/8GNqR9LeMHHZDTWCbv+vXrvPHGG5w7d441a9bwzTff5BoOJk+ezJ9//smHH37I+fPnWbZsGfPmzTMY1+Pj48Pff//NzZs3uXv3LqC7DHzfvn2MHz+eo0ePcuHCBTZt2sTEiROLZL9atGjB5MmTmTx5Mm+88QZ79uzh6tWr7N+/n8WLF6PRaDAzk4+3EEIUh3St4s0fj/HLUV3QmTewIR1re+a9YTEpPV0UokCGDBlCYmIiTZs2xdzcnIkTJ+Y6sV/Dhg354Ycf+O9//8uHH35IxYoVmTFjBsOGDdO3mTFjBmPGjMHPz4/k5GSUUtStW5fdu3fz3nvv0bp1a5RS+Pn50a9fvyLbt88//5ymTZsyf/58lixZQkJCAh4eHjz77LPs27cPJyenIntvIYQQOulaxX9+OsaGIzcxN9Mwb2ADXggoOUEHQKMKcj2ziYmJicHZ2Zno6OgsX5BJSUmEhobi6+ub4xVFJVXbtm2pX7++3KKhCJTmz4UQQhQWrVbx1s/H+SnkBuZmGr4Z0IAX61Q0bKQU3D4JnnUK/f1z+/5+lPTzCyGEEOKxabWKd9Y/DDpf9a+ffdD5/S34vi2c2WyUOkHCjiihxo4da3AZ+6OPsWPHGrs8IYQo07RaxbsbTvDDoRuYaWBuv/p0retl2Egp+OMdOPg9aNMhKdo4xSJjdkzarl27jF1Cgc2YMcNgUPSjZCyOEEIYj1areG/jCdYGX9cHnW71sgk6W9+FA9/pnnf7GhoMLv5iH5CwI0qkChUqUKGCcSehEkIIYUirVbz/y0nWHNQFnTl969O9/lOGjZSCbe/D/m91z1/6ChoOKf5iH2HU01g+Pj76m0k++hg/fjygm8xu2rRpeHl5YWtrS9u2bTl16pTBayQnJzNx4kTKly+Pvb093bp1y3ZSOSGEEEIUnFKK/246yeoD19Bo4PM+9ejRIJugs30q7June971S2g0rLhLzcKoYSc4OFh/M8mwsDC2b98OQJ8+fQD0d7WeN28ewcHBeHp60qFDB2JjY/WvERgYyIYNG1i7di179uwhLi6Orl275nprAyGEEELkn1KKDzadYuV+XdCZ3bsePRtWytwIdnwAe7/RPe8yBxoPL/5is2HUsOPu7o6np6f+8euvv+Ln50ebNm1QSvHll1/y3nvv0bNnTwICAli2bBkJCQmsXr0a0N3PaPHixXzxxRe0b9+eBg0asHLlSk6cOMGOHTuMuWtCCCGESVBKMX3zaZbvu4pGA5/1qkvvRtkEnT+nw79f6Z6/+Dk0GVn8xeagxFyNlZKSwsqVKxkxYgQajYbQ0FDCw8Pp2LGjvo21tTVt2rTR38QxJCSE1NRUgzZeXl4EBARkudGjEEIIIR6PUooZv54maO8VAD7tWZc+jb0zN4K/PoQ9c3XPO8+GpqOKt9A8lJgByhs3biQqKko/U294eDgAHh6G99Xw8PDg6tWr+jZWVla4uLhkaZOxfXaSk5NJTk7WP4+JiSmMXRBCCCFMhlKKj347w9J/rwDwSc869G2STdDZ+TH884Xu+QufQrOcZ+k3lhLTs7N48WI6d+6Ml5fh5WvZ3YE787LM8moza9YsnJ2d9Q9vb+8c24rC4+PjI7M5CyFEKaCUYuaWMyzeEwrAzJfr0L9p5awNd30Cf8/W/dxpFjQvmfOglYiwc/XqVXbs2MGrr76qX+bpqbuvRuYemoiICH1vj6enJykpKURGRubYJjtTpkwhOjpa/7h+/Xph7UqZUNDQEhwcnOt9uR7HlStXDK7gc3Z2pnnz5mzebDhDZ1BQULZX/C1atCjb9RUrVqRv376EhoYWSp1CCFHaKKX45PezLPxH9+/gRz0CGNgsh6Cz+xPdz51mQotxxVjl4ykRYWfp0qVUqFCBLl266Jf5+vri6empv0ILdON6du/eTcuWLQFo1KgRlpaWBm3CwsI4efKkvk12rK2tcXJyMngI3e+3KLm7u2NnZ1eor7ljxw7CwsI4cOAATZs2pVevXpw8edKgjZOTk8FVf2FhYQwaNCjL+lu3brF69WqOHj1Kt27d5Io+IUSZo5Ti0z/OseDvywB82L02g5tXydpw92ewa5bu5w4fQovxxVjl4zN62NFqtSxdupShQ4diYfFwCJFGoyEwMJCZM2eyYcMGTp48ybBhw7Czs2PgwIEAODs7M3LkSCZPnsyff/7JkSNHGDx4MHXq1KF9+/bG2qUSo23btkyYMIEJEyZQrlw53NzceP/998m496uPjw8fffQRw4YNw9nZmVGjdAPKfv75Z2rXro21tTU+Pj588cUXBq959epVXn/9dX1vSIa9e/fy7LPPYmtri7e3N5MmTSI+Pl6/PnOPUEYPy8svv4ydnR3+/v5s2rTpsfbRzc0NT09Patasyccff0xqaio7d+40aKPRaAyu+vP09MTW1jbL+ooVK/Lcc8/xwQcfcPLkSS5evPhYtQghRGmmlGL21nN8t/sSANO71eaVFj5ZG/79uW6cDkD76dBqUvEVWUBGDzs7duzg2rVrjBgxIsu6t956i8DAQMaNG0fjxo25efMm27Ztw9HRUd9m7ty59OjRg759+9KqVSvs7OzYvHkz5ubmRVOwUpASb5xHAW5Qv2zZMiwsLDhw4ABff/01c+fO1Z/CAZg9ezYBAQGEhIQwdepUQkJC6Nu3L/379+fEiRNMmzaNqVOnEhQUBMD69eupVKkSM2bM0PeSAJw4cYJOnTrRs2dPjh8/zrp169izZw8TJkzItb7p06fTt29fjh8/zosvvsigQYO4f//+Y+9namoqCxcuBMDS0vKxt39URhBKTU19otcRQojSQinFF9vO8+0uXdD54KVaDG3pk7XhP3N0V14BtPsAngksthqfhEapAnyDmpjcbhGflJREaGgovr6+2NjY6ELHTK8cXqmIvXsLrOzz3bxt27ZERERw6tQpfQ/MO++8w6ZNmzh9+jQ+Pj40aNCADRs26LcZNGgQd+7cYdu2bfplb731Fr/99pt+9mofHx8CAwMJDAzUtxkyZAi2trYsWLBAv2zPnj20adOG+Ph4bGxssmyn0Wh4//33+fBD3R9OfHw8jo6ObNmyhRdeeCHXfbty5Qq+vr7Y2tpiZmZGYmIiWq0WHx8fQkJCcHV1BXRjcoYPH469/cPfm4ODg34sWFBQEIGBgURFRQFw48YN+vTpw40bN7h06RJWVlbZvn+Wz4UQQpRic7af5+s/LwAwtWstRj7jm7XRni91kwYCPD8Vns3+/oXFKbfv70cZvWdHFK3mzZsbnGpq0aIFFy5c0I9Hady4sUH7M2fO0KpVK4NlrVq1MtgmOyEhIQQFBRncnbxTp05otdpcB/vWrVtX/7O9vT2Ojo5ERETke//WrVvHkSNH2LRpE9WqVWPRokX6oJPB0dGRo0eP6h+Z52CKjo7GwcEBe3t7vL29SUlJYf369TkGHSGEMCVf7ngYdN7v8nT2Qeffrx8GnefeLxFB53GUmHl2Sg1LO10Pi7Heu5A92uMB2V+2n5/OP61Wy5gxY5g0Keu528qVsxnF/0DmU04ajQatVpvn+2Xw9vbG398ff39/HBwc6NWrF6dPnza4iaiZmRnVqlXL8TUcHR05fPgwZmZmeHh4ZPmdCCGEqfpqxwW+3KELOu+9+DSvtq6atdHeebr7XQG0fRfa/KcYKywcEnYel0bzWKeSjG3//v1Znvv7++c4pqlWrVrs2bPHYNnevXupXr26fhsrK6ssvTwNGzbk1KlTuYaKotamTRsCAgL4+OOP+eqrr/K9XV5hSAghTNG8vy4wd8d5AKZ0rsmoZ7MJOvu+hW3v6X5u8w60fbsYKyw8chrLxF2/fp033niDc+fOsWbNGr755htee+21HNtnXNn24Ycfcv78eZYtW8a8efN4882HXZY+Pj78/fff3Lx5k7t37wLw9ttvs2/fPsaPH8/Ro0e5cOECmzZtYuLEiUW+j5nrX7BgATdv3izW9xVCiNLkfzsv8vk2XdB564UajGnjl7XR/u9g6xTdz8++BW3fKcYKC5eEHRM3ZMgQEhMTadq0KePHj2fixIm5TuzXsGFDfvjhB9auXUtAQAD//e9/mTFjhv42HgAzZszgypUr+Pn54e7uDujG3uzevZsLFy7QunVrGjRowNSpU6lYsWJR76KBrl274uPjw8cff1ys7yuEEKXF/F2XmL31HAD/6VSDcW2z6dk+8D388aAXp/Wb8Ny7ujMbpZRcjcVjXo1VirRt25b69evLLRqKQGn+XAghyq4Fuy8x6/ezAEzuUJ2J7fyzNjq4ELY86M1/5nXdJeYlNOjI1VhCCCGE0Fv492V90Hm9fQ5BJ3jRw6DT6rUSHXQeh4QdUSKNHTvW4DL2Rx9jx5bMG80JIURJteify3y85QwAr7Xz57X22QSdQ0vgt8m6n1tO1M2ObAJBB+RqLJO2a9cuY5dQYDNmzDAYFP0ouZeZEELk35I9oXz0my7oTHq+GoHZBZ2QIPj1dd3PLSbo7ndlIkEHJOyIEqpChQoGc+UIIYR4fEH/hjLj19MATHiuGq93qJ5lLjUOL4fND67SbT4OOn5kUkEH5DSWEEIIYZKW77vCtM26oDOurR+TO2YTdI6shE0PJoNtNhY6zTS5oAMSdvLtcWb1FaZPPg9CiJJsxb4r/PcX3f0Mx7bx4z+damQNOkdXwy8TAAVNR8MLn5hk0AE5jZUnKysrzMzMuHXrFu7u7lhZWWX9wIgyQylFSkoKd+7cwczMTO6fJYQocVYduMrUB0FnzLNVefuFbILOsbWwcRygoMmr0Pkzkw06IGEnT2ZmZvj6+hIWFsatW0a6J5Yocezs7KhcuTJmZtI5KoQoOdYcvMZ7G04C8OozvrzTuWY2QWcdbBgLKGg8El783KSDDkjYyRcrKysqV65MWlparnf+FmWDubk5FhYW0sMnhChR1gVfY8r6EwCMaOXLe12ezvrv1PEfYeODoNNoeJkIOiBhJ980Gg2WlpZZ7tIthBBCGNsPwdd550HQGdbSh6ldswk6J36CDaNBaaHhEOgyB8pI73TZ2EshhBDCRP146Dpvrz+OUjC0RRU+eKlW1qBz8mdYP0oXdBoMhq5flZmgAxJ2hBBCiFLr55AbvPWzLui80rwK07rVzhp0Tm2Anx8EnfqD4KVvylTQAQk7QgghRKm04cgN3vzpGErB4OaVmdE9m6Bz+hf4aSSodKg3ELqVvaADEnaEEEKIUmfjkZtM/kEXdAY2q8yMbgHZBJ1N8NMIXdCp2x+6zwMzc+MUbGQSdoQQQohS5JejN3njh6NoFQxo6s1H3QMwM8sUdM78Cj8NB20a1OkLPb4ts0EHJOwIIYQQpcbmY7d4fZ0u6PRr7M3HPepkDTpnt8CPQx8EnT7w8ndlOuiAhB0hhBCiVPjteBiBD4JOn0aVmNUzm6Bz7g/4YYgu6AT0gh4SdEDCjhBCCFHi/X4ijElrj5CuVfRqWIlPetXNGnTOb4UfXgFtKtR+GV7+HsxlOj2QsCOEEEKUaH+cDGPiGl3Q6dngKT7rXRfzzEHnwnZYNxjSU6BWd+i5SILOIyTsCCGEECXU1lPhTFh9hDStokd9L2b3qZdN0NkBawfpgs7TL0GvxRJ0MpGwI4QQQpRA206FM37VYdK0iu71vfiib/2sQefin7B2IKQnQ82u0HspmMttjTKTsCOEEEKUMDtO32b8al3QeameF19k16Nz6a+HQadGFwk6uZCwI4QQQpQgf565zf+tCiE1XdG1bkXm9q2HhXmmr+vLu2DNAEhLguqdoU8QWFgZo9xSQcKOEEIIUUL8dfY2/7fyMKnpii51KvJlv/rZBJ3dsLr/g6DzAvRdJkEnDxJ2hBBCiBJg59kIxq44TEq6lhfrePJl/2yCTug/sLofpCWCf0fouxwsrI1TcCkiYUcIIYQwsl3nIhizIoSUdC2dAzz5qn8DLDMHnSt7YHVfXdCp1gH6rpCgk08SdoQQQggj2n3+DqMfBJ1OtT34ekA2QefqXljVB1ITwK8d9FsJljbGKbgUkrAjhBBCGMnf5+8wavkhUtK0dKzlwTcDGmYTdPbByt4Pgs7z0H+1BJ3HJGFHCCGEMIJ/LjwMOh1qeTBvYEOsLDJ9LV87AKt6Q2o8VG0rQaeAjB52bt68yeDBg3Fzc8POzo769esTEhKiX6+UYtq0aXh5eWFra0vbtm05deqUwWskJyczceJEypcvj729Pd26dePGjRvFvStCCCFEvvx78S6vLjtEcpqW9k9X4H/ZBZ3rB2FlL0iJA99nof8asLQ1TsGlnFHDTmRkJK1atcLS0pLff/+d06dP88UXX1CuXDl9m88++4w5c+Ywb948goOD8fT0pEOHDsTGxurbBAYGsmHDBtauXcuePXuIi4uja9eupKenG2GvhBBCiJztvXiXkcuCSU7T0q5mBf43KLugEwwrekJKLPi0hgHrwMrOOAWbAI1SShnrzd955x3+/fdf/vnnn2zXK6Xw8vIiMDCQt99+G9D14nh4ePDpp58yZswYoqOjcXd3Z8WKFfTr1w+AW7du4e3tzZYtW+jUqVOedcTExODs7Ex0dDROTk6Ft4NCCCHEI/ZeusuIoGCSUrU8X7MC8wc3xNrC3LDRjUOw4mVIjtEFnYHrwMreOAWXcPn9/jZqz86mTZto3Lgxffr0oUKFCjRo0ICFCxfq14eGhhIeHk7Hjh31y6ytrWnTpg179+4FICQkhNTUVIM2Xl5eBAQE6NtklpycTExMjMFDCCGEKEr7Lt3TB53narjnEHRCHgadKq0k6BQSo4ady5cvM3/+fPz9/dm6dStjx45l0qRJLF++HIDw8HAAPDw8DLbz8PDQrwsPD8fKygoXF5cc22Q2a9YsnJ2d9Q9vb+/C3jUhhBBCb//lh0GnTXV35g9ulDXo3Hwk6FRuCQN/kKBTSIwadrRaLQ0bNmTmzJk0aNCAMWPGMGrUKObPn2/QTqMxvPmZUirLssxyazNlyhSio6P1j+vXrz/ZjgghhBA5OHD5HsOXBpOYms6z1d1Z8EojbCwzB53DsPxlSI6Gyi1g0I9g7WCcgk2QUcNOxYoVqVWrlsGyp59+mmvXrgHg6ekJkKWHJiIiQt/b4+npSUpKCpGRkTm2ycza2honJyeDhxBCCFHYgq/cZ3iQLui09i/P99kFnVtHYEUPXdDxbi5BpwgYNey0atWKc+fOGSw7f/48VapUAcDX1xdPT0+2b9+uX5+SksLu3btp2bIlAI0aNcLS0tKgTVhYGCdPntS3EUIIIYrboSv3GbbkIAkp6TxTrTwLhzTOJugcheU9ICkavJvB4J/A2tEY5Zo0C2O++euvv07Lli2ZOXMmffv25eDBg3z//fd8//33gO70VWBgIDNnzsTf3x9/f39mzpyJnZ0dAwcOBMDZ2ZmRI0cyefJk3NzccHV15c0336ROnTq0b9/emLsnhBCijAq5ep+hSw4Sn5JOq2pu2QedsGOwvDskRUGlpjBIgk5RMWrYadKkCRs2bGDKlCnMmDEDX19fvvzySwYNGqRv89Zbb5GYmMi4ceOIjIykWbNmbNu2DUfHhx+IuXPnYmFhQd++fUlMTKRdu3YEBQVhbm6e3dsKIYQQRSbkaiRDlwQTn5JOSz83Fg1pgq1Vpu+j8BOPBJ0mMPhnsJEhFUXFqPPslBQyz44QQojCcPhaJEMWHyQuOY0WVd1YMiyHoLOsGyTeh6cawSsbwMbZOAWXcqVinh0hhBDCVBy5FsnQB0GneVVXFg9rnE3QOfkw6Hg1hMHrJegUAwk7QgghxBM6ej2KIYsPEpucRlNfV5YMa4KdVaaRIrdPw/KMoNNA16NjW84o9ZY1EnaEEEKIJ3DsehSvLD6gCzo+rizNKegsewkS7kHF+hJ0ipmEHSGEEKKAjt+IYvDiA8QmpdHEx4Wlw5tgb50p6ESceRB07kLFejBkI9i6ZPt6omhI2BFCCCEK4OTNaAYv0gWdxlVcWDq8aTZB5+zDoONZF17ZKEHHCCTsCCGEEI/p5M1oBi06QExSGo2quBA0oikOmYPOnXO6oBN/BzzrwJBfwM7VOAWXcRJ2hBBCiMeQEXSiE1NpWLkcQcObZBN0zkNQV4iPAI86MGSTBB0jkrAjhBBC5NPpWzEMXqwLOg0ql2PZiKY42lgaNrp7AZZlBJ0A6dEpASTsCCGEEPlw+lYMgxbtJyohlXreOQWdi7oenbjbUKG2rkfH3s04BQs9CTtCCCFEHs6E6YJOZEIq9So5s3xEU5wyB517l3Q9OnHhUKEWDJWgU1JI2BFCCCFycS48lkGLDhCZkErdSs4sH9kMZ9tsgk5QV4gNA/enH/TolDdOwSILCTtCCCFEDs6FxzJw4X7ux6dQ5ylnVozIJujcv6y76ir2FrjXhKGbwcHdOAWLbEnYEUIIIbJx/rYu6NyLTyHgKSdWjmyGs102QSeoK8TchPI1JOiUUBJ2hBBCiEwuPBJ0anvlFHRCIeilB0Gn+oOgU8E4BYtcSdgRQgghHnExIo4BCw9wNy6FWhWdWPVqM8rZWRk2iryqO3UVcwPc/HVBx9HDOAWLPEnYEUIIIR7QBZ393I1L5uncgk5QV4i+Dm7VYNiv4OhpnIJFvkjYEUIIIYBLd3RB505sMjU9HVn1ajNc7DMFnahrusvLo6+Bqx8MlaBTGkjYEUIIUeZdvhPHgO8fBp3Vo5rjmiXoXNf16ERdA9equh4dp4rGKVg8Fgk7QgghyrTQu/EMWLifiNhkanjoenSyBJ3oG7oenair4OKr69Fx8jJOweKxSdgRQghRZl25G8+A7/dzOyaZ6h4OrBrVDDcHa8NG0TchqAtEXtEFnWG/gfNTRqlXFIyEHSGEEGXS1Xu6Hp3wmCT8KziwelRzymcOOjG3Hgk6PrpTVxJ0Sh0JO0IIIcqca/cSGPD9fsKik6iWZ9AJhXJVdKeunCsZp2DxRCTsCCGEKFOu3Uug//f7uBWdhJ+7PatHNcPdMXPQCdMNRr5/GcpV1vXolPM2TsHiiUnYEUIIUWZcv5/AgIX7uRWdRFV3e9aMak4FRxvDRrHhusHI9y+Bc2Vdj065ysYpWBQKCTtCCCHKhOv3E+j//X5uRiVStbw9a0c1p4JTNkEnqCvcuwjO3jBsM7hUMU7BotBI2BFCCGHybkTqenRuRiXiW96eNaOzCzq3dbeAuHcBnCrpbgHh4mOUekXhkrAjhBDCpN2MSmTAwv3ciEzEx82ONaOa45E56MRF6ILO3fPg9JRujI6rr3EKFoVOwo4QQgiTdSsqkQHf7+f6/USquNmxZnRzPJ0zB507D4LOOXD0kqBjgiTsCCGEMElh0Yn0/34/1+4nUMXNjrWjm1PR2dawUUbQuXP2kaBT1TgFiyIjYUcIIYTJCY9O0gedyq66U1dZgk78XVjeDe6cAceKuqDj5mecgkWRkrAjhBDCpOiCzj6u3kvA29WWNaOb41Uuc9C5B8u6QcRpcPDUXV4uQcdkSdgRQghhMm7HJDFg4X6u3Eugkosta0Y156nsgs7ybhBxShd0hv0K5asZp2BRLCTsCCGEMAkRMUkM+H4/oXfjeaqcLuhUcrEzbJRwH5Z3h9snwcFDd3l5eX/jFCyKjYQdIYQQpV5ETBL9F+7n8oOgs3Z0c7xdsws63eD2CbCvoAs67tWNU7AoVhJ2hBBClGoRsbpTV5fvxOPlbJNL0OkO4SfA3v1B0KlhnIJFsTNq2Jk2bRoajcbg4enpqV+vlGLatGl4eXlha2tL27ZtOXXqlMFrJCcnM3HiRMqXL4+9vT3dunXjxo0bxb0rQgghjOBObDIDFx7g0p14KjrbsHZ0i6xBJzESVvSA8ONgV143GLlCTaPUK4zD6D07tWvXJiwsTP84ceKEft1nn33GnDlzmDdvHsHBwXh6etKhQwdiY2P1bQIDA9mwYQNr165lz549xMXF0bVrV9LT042xO0IIIYqJLujs52JE3IOg05zKbpmDThQs7wFhxx4Enc0SdMogC6MXYGFh0JuTQSnFl19+yXvvvUfPnj0BWLZsGR4eHqxevZoxY8YQHR3N4sWLWbFiBe3btwdg5cqVeHt7s2PHDjp16lSs+yKEEKJ43I1LZtCi/VyIiMPTyYY1o5pTxc3esFFilK5HJ+wo2Lnpgo5HLSNUK4zN6D07Fy5cwMvLC19fX/r378/ly5cBCA0NJTw8nI4dO+rbWltb06ZNG/bu3QtASEgIqampBm28vLwICAjQt8lOcnIyMTExBg8hhBClw724ZAYtPMD523F4OFmzZnRzfMpnCjpJ0bDiZbh1BGxdJeiUcUYNO82aNWP58uVs3bqVhQsXEh4eTsuWLbl37x7h4eEAeHh4GGzj4eGhXxceHo6VlRUuLi45tsnOrFmzcHZ21j+8vb0Lec+EEEIUhXtxyQxadIBzt2Op4GjNmlHN8c026PSEW4cfBJ1N4FHbOAWLEsGoYadz58706tWLOnXq0L59e3777TdAd7oqg0ajMdhGKZVlWWZ5tZkyZQrR0dH6x/Xr159gL4QQQhSH+/EpDFp0gLPhD4LO6OZUdXcwbJQUAyt7wc1DYOuiCzqedYxTsCgxjH4a61H29vbUqVOHCxcu6MfxZO6hiYiI0Pf2eHp6kpKSQmRkZI5tsmNtbY2Tk5PBQwghRMkV+UjQcXe0ZvWo5vjlFHRuBINNORgiQUfolKiwk5yczJkzZ6hYsSK+vr54enqyfft2/fqUlBR2795Ny5YtAWjUqBGWlpYGbcLCwjh58qS+jRBCiNItI+icCYuhvIPu1FW1CpmCTnIsrOoNNw4+CDq/QMW6RqlXlDxGvRrrzTff5KWXXqJy5cpERETw0UcfERMTw9ChQ9FoNAQGBjJz5kz8/f3x9/dn5syZ2NnZMXDgQACcnZ0ZOXIkkydPxs3NDVdXV9588039aTEhhBClW1RCCoMXH+B0WAzlHaxYO7pZ9kFnZW+4fgBsnHVBx6u+UeoVJZNRw86NGzcYMGAAd+/exd3dnebNm7N//36qVKkCwFtvvUViYiLjxo0jMjKSZs2asW3bNhwdHfWvMXfuXCwsLOjbty+JiYm0a9eOoKAgzM3NjbVbQgghCkF0QiqDFx/g1K0Y3OytHvToOBo2So6DVX3g+n4JOiJHGqWUMnYRxhYTE4OzszPR0dEyfkcIIUqAjKBz4ma0LuiMbk51jxyCzrW9YO0MQzbAU42MU7Awivx+f5eoMTtCCCFEdGIqryzRBR1XeytWj8om6KTEw+p+D4KOE7wiQUfkTMKOEEKIEiMmKZUhiw9w/EY0LnaWrB7VjBqeOQSdq3seBp1KEnREziTsCCGEKBF0Qecgx/RBpzk1PTOdmkhJ0AWdK/+AlSMMXg+VGhunYFFqSNgRQghhdLFJqQxdcpCj16MoZ2fJqleb83TFbILOmkeCzivrwbuJcQoWpYqEHSGEEEaVEXSOXIvC2daSVa82o5ZXpqCTmghrB0Do32DlAIN/Bu+mxilYlDoSdoQQQhhNXHIaw5YGc/iRoFPby9mwUWoirBkAl3eBpb0u6FRuZpR6RekkYUcIIYRRxCWnMWzJQUKuRuJkY8GqV5sR8FTmoJMEawfC5Z2PBJ3mxilYlFoSdoQQQhS7+OQ0hi89yCF90Gmec9C59NeDoPMTVGlhnIJFqSZhRwghRLHSBZ1ggq9E4mhjwcpXm1GnUjZBZ90guPQnWNrBoB+gitzzUBSMhB0hhBDFJiEljeFBwRy8ch9HawtWjmxG3UrlDBulJcMPr8DFHbqgM/AH8HnGKPUK0yBhRwghRLFISEljRFAwB0N1QWfFq82o513OsFFaMqx7BS5sAwtbGLgOfFsbpV5hOiTsCCGEKHKJKemMDDrE/sv3cbC2YPnIptTPLuj8MBQubAULmwdB51mj1CtMi4QdIYQQRSoxJZ2Ry4LZd/keDtYWLBvRlAaVXQwbpaXAj8Pg/O+6oDNgLVRtY5R6hemRsCOEEKLIZASdvZfuYW9lzrIRTWhUJYegc27Lg6CzBvyeM0q9wjRJ2BFCCFEkElPSeXX5w6CzfGRTGlVxNWyUngo/DYdzv4G5NfRfDX7PG6dgYbIk7AghhCh0GUHn34v5CDpnf9UFnQGroVo74xQsTJqEHSGEEIUqMSWdUcsP6YPOshE5BZ0RcGYzmFvpenSqtTdOwcLkSdgRQghRaJJSdUFnz8W7+qDT2CeboPPzq3Bmky7o9FsF/hJ0RNGRsCOEEKJQJKWm8+qyh0EnKNugkwbrR8HpjWBmCf1WQvWORqlXlB0SdoQQQjyxR4OO3YOg0yS7oLNhNJza8EjQ6WScgkWZImFHCCHEE3n01JXdg1NX2QedMXDy5wdBZwXUeME4BYsyR8KOEEKIAssIOv9cyCXoaNNh41g4+ROYWUDfZVCjs3EKFmWShB0hhBAFkjnoBA3PIehsGAMnftQFnT5BULOLUeoVZZeEHSGEEI8tu6DT1DcfQefpl4xSryjbJOwIIYR4LEmp6YxeEaIPOkuHNckh6IyVoCNKBAk7Qggh8i0j6Px9/o4+6DSr6mbYSB90ftAFnd5LJegIo5KwI4QQIl8eDTq2lrkEnY3/Zxh0anUzTsFCPCBhRwghRJ4yB52g4bkEnePrHgSdJRJ0RIkgYUcIIUSuklLTGfNoj06OQWecLuhozB8Ene7GKViITCTsCCGEyFFSajpjV4aw+5Gg0zzHoLNWF3T6LJWgI0oUCTtCCCGylRF0dp3TBZ0lw3IIOr+Ml6AjSjQJO0IIIbJISk3n/zIFnRZ+OQSdY2vk1JUo0SwKumFUVBQHDx4kIiICrVZrsG7IkCFPXJgQQgjjSE7TBZ2d5+5gY2mWS9CZYBh0avcwSr1C5KVAYWfz5s0MGjSI+Ph4HB0d0Wg0+nUajUbCjhBClFLJaemMXfEw6Cwd1jSXoLP6QdBZLEFHlGgFOo01efJkRowYQWxsLFFRUURGRuof9+/fL1Ahs2bNQqPREBgYqF+mlGLatGl4eXlha2tL27ZtOXXqlMF2ycnJTJw4kfLly2Nvb0+3bt24ceNGgWoQQoiyLHPQybFHZ9PETEHnZeMULEQ+FSjs3Lx5k0mTJmFnZ1coRQQHB/P9999Tt25dg+WfffYZc+bMYd68eQQHB+Pp6UmHDh2IjY3VtwkMDGTDhg2sXbuWPXv2EBcXR9euXUlPTy+U2oQQoizQnbo6bBB0WvqVN2yk1cKmSXB0lS7o9FokQUeUCgUKO506deLQoUOFUkBcXByDBg1i4cKFuLi46Jcrpfjyyy9577336NmzJwEBASxbtoyEhARWr14NQHR0NIsXL+aLL76gffv2NGjQgJUrV3LixAl27NhRKPUJIYSpywg6f52N0AWdoTkFnYlwdOXDoBPQ0zgFC/GYCjRmp0uXLvznP//h9OnT1KlTB0tLS4P13brlf8bM8ePH06VLF9q3b89HH32kXx4aGkp4eDgdO3bUL7O2tqZNmzbs3buXMWPGEBISQmpqqkEbLy8vAgIC2Lt3L506dSrI7gkhRJmRnJbOuMxBp1peQWehBB1RqhQo7IwaNQqAGTNmZFmn0WjyfQpp7dq1HD58mODg4CzrwsPDAfDw8DBY7uHhwdWrV/VtrKysDHqEMtpkbJ+d5ORkkpOT9c9jYmLyVa8QQpiSjKDz54OgszjfQaeXcQoWooAKdBpLq9Xm+Mhv0Ll+/TqvvfYaK1euxMbGJsd2j17pBbrTW5mXZZZXm1mzZuHs7Kx/eHt756tmIYQwFclp6YxfpQs61ha6oNMqu6CzOSPomEnQEaWW0SYVDAkJISIigkaNGmFhYYGFhQW7d+/m66+/xsLCQt+jk7mHJiIiQr/O09OTlJQUIiMjc2yTnSlTphAdHa1/XL9+vZD3TgghSq6MoLPjjC7oLBmWS9A5khF0FknQEaVWvk9jff3114wePRobGxu+/vrrXNtOmjQpz9dr164dJ06cMFg2fPhwatasydtvv03VqlXx9PRk+/btNGjQAICUlBR2797Np59+CkCjRo2wtLRk+/bt9O3bF4CwsDBOnjzJZ599luN7W1tbY21tnWeNQghhalLStPkMOpMeBp2e0qMjSrd8h525c+cyaNAgbGxsmDt3bo7tNBpNvsKOo6MjAQEBBsvs7e1xc3PTLw8MDGTmzJn4+/vj7+/PzJkzsbOzY+DAgQA4OzszcuRIJk+ejJubG66urrz55pvUqVOH9u3b53fXhBCiTEhJ0zJuVYg+6OR86moSHFnxMOjU6W2cgoUoJPkOO6Ghodn+XJTeeustEhMTGTduHJGRkTRr1oxt27bh6OiobzN37lwsLCzo27cviYmJtGvXjqCgIMzNzYulRiGEKA10QeewQdB5xj+boPPraxJ0hMnRKKVUQTdOSUkhNDQUPz8/LCwKfJsto4uJicHZ2Zno6GicnJyMXY4QQhSqh0HnNtYWZiwa2pjW/u6GjTKCzuHlEnREqZHf7+8CDVBOSEhg5MiR2NnZUbt2ba5duwboxup88sknBatYCCFEoUtJ0zJ+dX6CTuDDoPPy9xJ0hEkpUNiZMmUKx44dY9euXQaXjbdv355169YVWnFCCCEKLiPobD+tCzoLh+QWdJY9DDp1+xilXiGKSoHOPW3cuJF169bRvHlzg/lsatWqxaVLlwqtOCGEEAWTkqZlwoOgY/Ug6DxbPZug89vrjwSdBRJ0hEkqUM/OnTt3qFChQpbl8fHxeU74J4QQomilpGmZuOYw2x4EnUW5BZ2QoEeCTl+j1CtEUStQ2GnSpAm//fab/nlGwFm4cCEtWrQonMqEEEI8ttR0XdDZeiqvoPPGw6DT4zsJOsKkFeg01qxZs3jhhRc4ffo0aWlpfPXVV5w6dYp9+/axe/fuwq5RCCFEPqSm605dZQSdnE9dvQEhSx8GnXr9jFOwEMWkQD07LVu25N9//yUhIQE/Pz+2bduGh4cH+/bto1GjRoVdoxBCiDykpmuZuPqIQdBpk13Q2TJZF3TQSNARZcYTzbNjKmSeHSFEaZYxRicj6Hz/SiPa1sg0rjIj6BxaAmh0Y3Qk6IhSrkjn2TE3NyciIiLL8nv37snMxUIIUYwyLi/PO+i8+UjQkR4dUbYUaMxOTp1BycnJWFlZPVFBQggh8ifzzMjZjtFR6kHQWczDoNPfKPUKYSyPFXYy7nau0WhYtGgRDg4O+nXp6en8/fff1KxZs3ArFEIIkUVyWrrB3cuznRlZKfht8sOg02O+BB1RJj1W2Mm427lSiu+++87glJWVlRU+Pj589913hVuhEEIIA8lp6fzfysP8dTaXm3pmF3TqDzBKvUIY22OFnYy7nT/33HOsX78eFxeXIilKCCFE9pJS0/m/lSHsPHcHG0td0GlVLZug8+ipqx7fStARZVqBxuzs3LlT/3PG+B2ZOVkIIYpWUmo6Y1aEsPu8LugsGdaEln45BJ3gRTwMOgONUq8QJUWBrsYCWL58OXXq1MHW1hZbW1vq1q3LihUrCrM2IYQQDySlpjP6QdCxtTRn6bCmOQSd/zwMOt3/J0FHCArYszNnzhymTp3KhAkTaNWqFUop/v33X8aOHcvdu3d5/fXXC7tOIYQos5JS0xm1/BD/XLirCzrDm9C8qpthI6Xg97cgeCH6oNNgkFHqFaKkKdCkgr6+vkyfPp0hQ4YYLF+2bBnTpk3Tj+0pLWRSQSFESZWYogs6ey7exc7KnKXDmtAsu6Dz6Kmr7vOgwWCj1CtEccrv93eBenbCwsJo2bJlluUtW7YkLCysIC8phBAik8SUdF5dHsy/F+9hb2VO0IimNPFxNWyknzDwwWBkCTpCZFGgMTvVqlXjhx9+yLJ83bp1+Pv7P3FRQghR1iWkpDEi6GHQWZZj0JlseNWVBB0hsihQz8706dPp168ff//9N61atUKj0bBnzx7+/PPPbEOQEEKI/MsIOvsv38fB2oJlI5rQqEo2Qee31yEkCJlHR4jcFahnp1evXhw8eJDy5cuzceNG1q9fT/ny5Tl48CAvv/xyYdcohBBlRkJKGsOXPhp0mmYfdH59TRd0NGa6m3pK0BEiR4/ds5Oamsro0aOZOnUqK1euLIqahBCiTIpPTmN4UDAHQ+/jaG3BspFNaVg50+StWi1sngRHVjwMOnX7GqdgIUqJx+7ZsbS0ZMOGDUVRixBClFlxyWkMW3pQF3RsLFjxarPsg86miQ+DTs+FEnSEyIcCncZ6+eWX2bhxYyGXIoQQZVNcchrDlhwk+EokjjYWrBzZjPre5QwbadNh0wQ4uvJh0KnT2yj1ClHaFGiAcrVq1fjwww/Zu3cvjRo1wt7e3mD9pEmTCqU4IYQwdbFJqQxbGkzI1UicbCxY+Woz6lYqZ9hImw6/jIdja0BjDr0WQkAvo9QrRGlU4EkFc3xBjYbLly8/UVHFTSYVFEIYQ2xSKkOXHOTwtSicbS1ZObIZdSo5GzbSpsPGcXB8rS7o9F4MteVCECGgiCcVfHSGZLkRqBBCPL6YB0HnyIOgs+rVZgQ8lU3Q2TAWTvwAZhbQewnU6m6cgoUoxQp8I9DFixcTEBCAjY0NNjY2BAQEsGjRosKsTQghTFJ0YiqvLNYFnXJ2OQSd9DTYMOaRoLNUgo4QBVSgnp2pU6cyd+5cJk6cSIsWLQDYt28fr7/+OleuXOGjjz4q1CKFEMJURCekMmTJAY7diNYHndpe2QWd0XDyZ13Q6RMET79klHqFMAUFGrNTvnx5vvnmGwYMMJzEas2aNUycOJG7d+8WWoHFQcbsCCGKQ2R8CoMXH+DUrRhc7CxZ9Wpzanll+jcnPQ3Wj4JT68HMEvoug5pdjFOwECVckY7ZSU9Pp3HjxlmWN2rUiLS0tIK8pBBCmLS7cckMXnSAs+GxlHewYtWrzanh6WjYKD0Vfn4VTm98EHSWQ80XjVKvEKakQGN2Bg8ezPz587Ms//777xk0aNATFyWEEKYkIjaJAd/v52x4LO6O1qwdnVPQGfkw6PRbIUFHiEJSoJ4d0A1Q3rZtG82bNwdg//79XL9+nSFDhvDGG2/o282ZM+fJqxRCiFIqPDqJgQv3c/luPJ5ONqwe1Yyq7g6GjdJT4afhcGYzmFtB3xVQ4wXjFCyECSpQ2Dl58iQNGzYE4NKlSwC4u7vj7u7OyZMn9e3kcnQhRFl2MyqRgQv3c/VeAk+Vs2X1qGZUcTOchJW0FF3QOfurLuj0WwXVOxqnYCFMVIHCzs6dOwu7DiGEMCnX7ycwYOF+bkQm4u1qy+pXm+PtamfYKC0FfhwG534Dc2vovxr82xulXiFMWYHn2SkM8+fPp27dujg5OeHk5ESLFi34/fff9euVUkybNg0vLy9sbW1p27Ytp06dMniN5ORkJk6cSPny5bG3t6dbt27cuHGjuHdFCCH0rt6Lp9+CfdyITMTHzY51o1vkEHSGPgw6AyToCFFUjBp2KlWqxCeffMKhQ4c4dOgQzz//PN27d9cHms8++4w5c+Ywb948goOD8fT0pEOHDsTGxupfIzAwkA0bNrB27Vr27NlDXFwcXbt2JT093Vi7JYQowy7diaPvgn3cik6iqrs968a0wKucrWGjtGT4YQic2wIWNjBgDVSToCNEUSnQPDtFydXVldmzZzNixAi8vLwIDAzk7bffBnS9OB4eHnz66aeMGTOG6Oho3N3dWbFiBf369QPg1q1beHt7s2XLFjp16pSv95R5doQQheHC7VgGLjrAndhkqns4sOrV5rg7Whs2Sk3SBZ0LWx8GHb/njVOwEKVcfr+/jdqz86j09HTWrl1LfHw8LVq0IDQ0lPDwcDp2fDhQz9ramjZt2rB3714AQkJCSE1NNWjj5eVFQECAvk12kpOTiYmJMXgIIcSTOBseQ//v93MnNpmano6sGZVd0EmEtQMfCTprJegIUQyMHnZOnDiBg4MD1tbWjB07lg0bNlCrVi3Cw8MB8PDwMGjv4eGhXxceHo6VlRUuLi45tsnOrFmzcHZ21j+8vb0Lea+EEGXJyZvRDPh+P/fiUwh4yok1o5rj5pAp6KTEw+q+cOlPsLSDQT+C33PGKViIMsboYadGjRocPXqU/fv383//938MHTqU06dP69dnvnxdKZXnJe15tZkyZQrR0dH6x/Xr159sJ4QQZdax61EMXLifyIRU6nmXY9WrzXGxtzJslBwLq/pA6N9g5QCDfwbfZ41TsBBlkNHDjpWVFdWqVaNx48bMmjWLevXq8dVXX+Hp6QmQpYcmIiJC39vj6elJSkoKkZGRObbJjrW1tf4KsIyHEEI8rsPXIhm86AAxSWk0quLCipFNcba1NGyUFA0resLVf8HaCV7ZCFVaGqVeIcoqo4edzJRSJCcn4+vri6enJ9u3b9evS0lJYffu3bRsqfuHolGjRlhaWhq0CQsL4+TJk/o2QghRFPZduscriw4Qm5xGU19Xlo1oipNNpqCTGAkrXoYbB8HGGYb8At5NjFOwEGVYgW8XURjeffddOnfujLe3N7Gxsaxdu5Zdu3bxxx9/oNFoCAwMZObMmfj7++Pv78/MmTOxs7Nj4MCBADg7OzNy5EgmT56Mm5sbrq6uvPnmm9SpU4f27eUyTiFE0dh5LoKxK0JITtPSqpobC4c0xs4q0z+nCfdhRQ8IOwa2rjBkI1SsZ4xyhSjzjBp2bt++zSuvvEJYWBjOzs7UrVuXP/74gw4dOgDw1ltvkZiYyLhx44iMjKRZs2Zs27YNR8eHN9CbO3cuFhYW9O3bl8TERNq1a0dQUBDm5ubG2i0hhAn7/UQYk9YeITVd0f7pCswb2BAby0z/3sTfheXd4fZJsCsPQzeBR23jFCyEKHnz7BiDzLMjhMiP9Ydv8OaPx9Aq6Fq3InP71cfSPNNogNjbsLwb3DkLDh4wZBNUqGmcgoUwcfn9/jZqz44QQpQWK/df5f2Nuhsd92lUiU961cXcLNNVnzFhsOwluHcBHL1g6GYoX80I1QohHiVhRwgh8rDw78t8vOUMAMNa+vDfrrUwyxx0om/ogs79y+DsrTt15VrVCNUKITKTsCOEEDlQSvHVnxf4cscFAMa19eM/nWpknccr8qou6ERdhXKVYeiv4FLFCBULIbIjYUcIIbKhlGLmljMs/CcUgP90qsH457I5JXX/MizrBtHXwcUXhv0KzpWKuVohRG4k7AghRCZarWLqLydZdeAaAB+8VIvhrXyzNrx7UdejE3sL3Px1p66cvIq5WiFEXiTsCCHEI9LStbz103HWH7mJRgOf9KxDvyaVsza8fVo3j07cbXCvqbvqyjHnmduFEMYjYUcIIR5ISk3ntbVH2HrqNuZmGub0rUf3+k9lbXjzMKzsqZsh2SNANzOyffniL1gIkS8SdoQQAohLTmP08kPsvXQPK3Mz5g1sQMfanlkbXt2nu6lnSiw81QgG/QR2rsVfsBAi3yTsCCHKvHtxyQwPCub4jWjsrcxZOLQxLf2y6am5tBPWDoTUBKjyDAxcC9aOWdsJIUoUCTtCiDLtVlQigxcf4PKdeFztrQga3oS6lcplbXh2C/w4FNJToFp76LsCrOyKvV4hxOOTsCOEKLMuRsQxZPEBbkUn4eVsw/KRzahWwSFrwxM/wfrRoNLh6Zeg12KwsC7+goUQBSJhRwhRJh2/EcWwpcHcj0+hqrs9K0Y246lytlkbHl4BmyYCCur2g+7fgrn80ylEaSJ/sUKIMmfvpbuMWnaI+JR06lZyZumwJrg5ZNNTs/87+ONt3c+NhkOXOWBmlrWdEKJEk7AjhChTtp4KZ+LqI6Ska2np58b3QxrjYJ3NP4X/fAF/ztD93GICdPwIMt8mQghRKkjYEUKUGT8cus47Px9Hq6BTbQ++6t8AG0tzw0ZKwV8f6sIOQJt3oO07EnSEKMUk7AghTJ5Sim93XWL21nMA9GvszccvB2BhnumUlFYLf7wDBxfonnf4EFpNKuZqhRCFTcKOEMKkpWsV0zefYvm+qwCMaVOVd16omfXO5empsHEcnPhB97zLF9Dk1WKuVghRFCTsCCFMVlJqOoFrj/LHqXA0Gvhv1xxu6JmSAD8OgwtbwcwCesyHun2LvV4hRNGQsCOEMElRCSmMWn6I4CuRWJmbMadfPbrWzeaO5IlRsKY/XNsHFrbQdzlU71js9Qohio6EHSGEybkZlcjQJQe5GBGHo40FC4c0pnlVt6wNY2/rbuh5+yRYO8PAdVClRfEXLIQoUhJ2hBAm5Wx4DEOXHOR2TDKeTjYsG9GUGp7Z3L8q8gos7wGRoWBfAV7ZAJ4BxV2uEKIYSNgRQpiMfZfuMXr5IWKT0/Cv4MCyEU3xym5W5NunYEVPiAuHclVgyEZwrVrs9QohioeEHSGESdh87BaTfzhGSrqWpj6uLBzSGGc7y6wNrx+EVb0hKRoq1ILB68GpYvEXLIQoNhJ2hBClmlKK7/++zKzfzwLQOcCTuf3qZ50sEODiDlj3CqQmQKWmMOgHsHUp5oqFEMVNwo4QotRKTdfy319OsebgNQCGtfRhatdamJtlM9vx8R908+hoU6Fae91VV1b2xVyxEMIYJOwIIUqlmKRUxq86zD8X7uY+h45SsPdr2P5f3fOAXtDjO7CwKt6ChRBGI2FHCFHq3IxKZMTSYM7djsXW0pyvBzSgQy2PrA21Wtj6LhyYr3veYoLuFhBy53IhyhQJO0KIUuXEjWhGLAvmTmwy7o7WLBnahDqVnLM2TE2CDWPg9Ebd844fQ8sJxVqrEKJkkLAjhCg1tp0K57W1R0lMTaempyOLhzXhqewuLU+MgrWD4OoeMLOEl7+DOr2LvV4hRMkgYUcIUeIppVjy7xU++u00SsGz1d3538AGONpkc2l59E1Y2QvunAFrJ+i3Eqq2Kf6ihRAlhoQdIUSJlpauZcavp/V3LR/YrDLTu9XG0jybcTe3T+vm0Im5CQ6eMPgn8KxTzBULIUoaCTtCiBIrOiGVCWseXnE1pXNNRrWuikaTzaXlV/6FtQN0kwWWrw6Df4ZylYu/aCFEiSNhRwhRIl2+E8eryw5x+W48tpbmzO1XjxcCcpjp+MRPujl00pPBuxkMWAt2rsVbsBCixJKwI4Qocf4+f4cJqw8Tk5SGl7MNC4c2prZXNldcKQX/fAF/fah7XrMr9FoEltkMWhZClFlGnWxi1qxZNGnSBEdHRypUqECPHj04d+6cQRulFNOmTcPLywtbW1vatm3LqVOnDNokJyczceJEypcvj729Pd26dePGjRvFuStCiEKglGLpv6EMW3qQmKQ0GlVx4ZcJz2QfdNJS4JcJD4NOiwm6WZEl6AghMjFq2Nm9ezfjx49n//79bN++nbS0NDp27Eh8fLy+zWeffcacOXOYN28ewcHBeHp60qFDB2JjY/VtAgMD2bBhA2vXrmXPnj3ExcXRtWtX0tPTjbFbQogCSEnT8u6GE0zffBqtgt6NKrF6VDPcHa2zNk6MglW94OhK0JjBi59Dp4/BLJv7YQkhyjyNUkoZu4gMd+7coUKFCuzevZtnn30WpRReXl4EBgby9ttvA7peHA8PDz799FPGjBlDdHQ07u7urFixgn79+gFw69YtvL292bJlC506dcrzfWNiYnB2diY6OhonJ6ci3UchRFb34pL5v1WHORh6HzMNTOn8NK+29s1+IHLkFVjVF+6eAysH6L0Uqncs9pqFEMaX3+/vEjVnenR0NACurrqBhaGhoYSHh9Ox48N/yKytrWnTpg179+4FICQkhNTUVIM2Xl5eBAQE6NsIIUqus+ExdP/fvxwMvY+jtQWLhzZh1LM5XHF14xAsaq8LOo5eMPx3CTpCiDyVmAHKSineeOMNnnnmGQICAgAIDw8HwMPD8J43Hh4eXL16Vd/GysoKFxeXLG0yts8sOTmZ5ORk/fOYmJhC2w8hRP79evwWb/10nISUdKq42bFoSGP8PRyzb3z6F1g/GtKSdHPnDPwBnLyKt2AhRKlUYsLOhAkTOH78OHv27MmyLvP/4Smlsv+/vny2mTVrFtOnTy94sUKIJ5KWrmX2tnMs2H0ZgFbV3Jg3oCEu9tnciTzzXcv9O0HvxWCdQygSQohMSsRprIkTJ7Jp0yZ27txJpUqV9Ms9PT0BsvTQRERE6Ht7PD09SUlJITIyMsc2mU2ZMoXo6Gj94/r164W5O0KIXNyPT2HY0mB90BnTpirLhjfNPuikJeuuuMoIOk1HQ//VEnSEEI/FqGFHKcWECRNYv349f/31F76+vgbrfX198fT0ZPv27fplKSkp7N69m5YtWwLQqFEjLC0tDdqEhYVx8uRJfZvMrK2tcXJyMngIIYreyZvRvPTNHvZcvIudlTnzBjZgSuenscju1g9xd2BZt4dXXL3wCbw4G8xLTIe0EKKUMOq/GuPHj2f16tX88ssvODo66ntwnJ2dsbW1RaPREBgYyMyZM/H398ff35+ZM2diZ2fHwIED9W1HjhzJ5MmTcXNzw9XVlTfffJM6derQvn17Y+6eEOIR6w/fYMr6EySnaaniZsf3rzSmhmcOPTThJ2DNAIi+DtbO0GcJVJO/ZyFEwRg17MyfPx+Atm3bGixfunQpw4YNA+Ctt94iMTGRcePGERkZSbNmzdi2bRuOjg//kZw7dy4WFhb07duXxMRE2rVrR1BQEObmMueGEMaWmq7l49/OELT3CgDP1XDny/4NcLbN5o7lAGc2w/oxkBoPrn4wcB2U9y++goUQJqdEzbNjLDLPjhBFIyI2iQmrj3Aw9D4Ak9r5E9jOHzOzbC4eUAr+/hx2fqR7XrUt9AkCW5esbYUQgvx/f8vJbyFEkdh36R4T1xzhblwyDtYWzOlbj461PbNvnJoIv4yHkz/rnjcbCx0/lvE5QohCIf+SCCEKlVarmL/7El9sO4dWQQ0PR74d3BA/d4fsN4i5BWsHwq0jYGahu/VD4+HFW7QQwqRJ2BFCFJrI+BRe/+Eou87dAXT3t/qwewC2VjmMn7u6D34cCnG3wdYV+q0An2eKsWIhRFkgYUcIUSgOX4tkwqrD3IpOwtrCjA+7B9C3iXf2jZWC4EXwxzugTYMKtXTz57j6Zt9eCCGegIQdIcQTUUqx9N8rzNxyhjStwre8Pd8OasjTFXMYLJiaCL9NhqOrdM9r94Tu88DKvviKFkKUKRJ2hBAFFpOUyts/Hef3k7o5srrUqcgnvergaJPDZeVR12HdYAg7qpsosP10aDkR8rj9ixBCPAkJO0KIAjl2PYpJa49w9V4CluYa3u9SiyEtquR837rLu+Gn4ZBwTzc+p89S3eXlQghRxCTsCCEei1arWPjPZWZvPUeaVvFUOVv+N6gh9b3LZb+BUrDvf7B9KigtVKwH/VZCucrFWrcQouySsCOEyLeI2CQm/3CMfy7cBXSnrWb2rJPzbMgp8bBp4sP5c+oNgK5zwdK2mCoWQggJO0KIfNp1LoI3fzzG3bgUbCzNmPZSbfo18c75tFXEWd1l5XfO6ubP6TQLmo6S8TlCiGInYUcIkauUNC2zt55l4T+hANT0dGTewAZUq5DDTTwBjv8Am1+D1ARw8NTd9qFKi+IpWAghMpGwI4TIUejdeCatOcKJm9EADG1RhSkvPo2NZQ6TBKYmwR9vQ0iQ7rlvG+i1GBzci6dgIYTIhoQdIUQWSinWBl/nw19Pk5CSTjk7S2b3rkeHWh45b3T/MvwwBMJPABpo8za0eQvMcghGQghRTCTsCCEM3IlN5p2fj/Pn2QgAmld15ct+DfB0tsl5o9ObdDfyTI4BOzfouRCqtSumioUQIncSdoQQeltPhTNl/Qnux6dgZW7GWy/UYEQrX8zMchhUnJYCOz6A/d/qnns3182f4+RVfEULIUQeJOwIIYhNSuXDX0/zw6EbADxd0Ym5/epR0zOHWz4ARF6Bn1+FG8G65y0nQrsPwDyHy9CFEMJIJOwIUcYdDL3PGz8c5UZkIhoNjHnWj9c7+GNtkctYm5M/w+ZA3WkrG2foMR9qdim2moUQ4nFI2BGijEpOS2fu9gss+PsSSkElF1vm9K1PU1/XnDdKiYff34IjK3XPvZtBr0UyG7IQokSTsCNEGXT0ehT/+fEYFyLiAOjTqBL/falWzjfwBAg7Dj+NgHsXAA08+ya0eQfM5Z8RIUTJJv9KCVGGJKWmM3fHeRb+fRmtgvIOVnz8ch061fbMeSOl4MAC3b2t0lPAsaLuaivf1sVXuBBCPAEJO0KUEYevRfKfH49x6U48AD3qe/HBS7VxsbfKeaP4u7BxHFzYqnte40XoNg/s3YqhYiGEKBwSdoQwcUmp6czZfp5F/+h6c9wdrfm4RwAdc+vNAbiwQzd3Tlw4mFtDp4+hyatybyshRKkjYUcIExZy9T7/+fE4l+/qenN6NnyK/3atRTm7XHpzUhJ0p6yCF+mel68OvZeAZ51iqFgIIQqfhB0hTFBsUiqzt55jxf6rKAUeTtbM6lmH52vmcrsHgBshsGE03Luoe95sLLSfBpa2RV6zEEIUFQk7QpiYP06GM23TKcJjkgDo3agSU7vWwtk2lyut0lPhny9g92eg0nWDkHt8C37PF1PVQghRdCTsCGEiwqIT+eCXU2w7fRsAHzc7Pn65Dq2qlc99w7sXdb05N0N0z2v3hC5fgF0u8+0IIUQpImFHiFIuXatYse8Kn287T1xyGhZmGsa0qcrE5/2xscxlFmSl4NBi2Po+pCXqZkLuMgfq9C6+4oUQohhI2BGiFDsTFsM7609w7HoUAA0rl2NWz7rU8HTMfcPIq7BpIoTu1j33baM7beVcqWgLFkIII5CwI0QpFJuUylc7LrB07xXStQpHawve7lyTgU0r53yHcgCtFkKWwLb/Qmo8WNhC+w+g6RgwMyu+HRBCiGIkYUeIUkQpxS9HbzFzyxkiYpMB6BzgybRutfFwssl94/uhut6cK//onlduCd3ngZtfEVcthBDGJWFHiFLibHgM//3lFAdD7wO6AcjTutWmbY0KuW+o1ULwQtgxDVITwNJOdzl5k1HSmyOEKBMk7AhRwsUkpTJ3+3mW77tKulZhY2nGxOf9ebW1L9YWuQxABrh3Sdebc/Vf3XOf1tDtG3D1LfrChRCihJCwI0QJpZRiw5GbzNxylrtxD09Zvd+1Fk+Vy2OSv/Q02P8/2DlLd6WVpT10mA6NR0pvjhCizJGwI0QJdPhaJB/+epoj16IAqFrenmndavNsdfe8N74ZAptfg/ATuue+z+p6c1x8iqxeIYQoySTsCFGC3IhM4LM/zrHp2C0A7KzMmfB8NUY+k49TVsmx8NdHcPB7UFqwdYGOH0H9QXLzTiFEmWbU/uy///6bl156CS8vLzQaDRs3bjRYr5Ri2rRpeHl5YWtrS9u2bTl16pRBm+TkZCZOnEj58uWxt7enW7du3Lhxoxj3QognF5ecxmd/nOX5L3az6dgtNBro27gSO99sy7i21fIOOme3wP+awYHvdEGnTl8YHwwNBkvQEUKUeUYNO/Hx8dSrV4958+Zlu/6zzz5jzpw5zJs3j+DgYDw9PenQoQOxsbH6NoGBgWzYsIG1a9eyZ88e4uLi6Nq1K+np6cW1G0IUWLpWsfbgNdrO3sW3uy6RkqaleVVXNk94hs9618v7cvKYW7BuMKwdADE3daeqBq+HXgvBIR+nvIQQogzQKKWUsYsA0Gg0bNiwgR49egC6Xh0vLy8CAwN5++23AV0vjoeHB59++iljxowhOjoad3d3VqxYQb9+/QC4desW3t7ebNmyhU6dOuXrvWNiYnB2diY6OhonJ6ci2T8hHqWUYs/Fu3z82xnOhuvCu4+bHe+++DQdanmgyas3Jj1Ndzn5zpmQHAMac2g1CZ59C6zsimEPhBDC+PL7/V1ix+yEhoYSHh5Ox44d9cusra1p06YNe/fuZcyYMYSEhJCammrQxsvLi4CAAPbu3Ztj2ElOTiY5OVn/PCYmpuh2RIhMjl2P4tM/zrL30j0AnGwseK19dV5pXgUri3x0tl75F7b8ByIenNJ9qjG89BV4BhRh1UIIUXqV2LATHh4OgIeHh8FyDw8Prl69qm9jZWWFi4tLljYZ22dn1qxZTJ8+vZArFiJ3l+7E8fnWc/x+UvfZtDI3Y3DzKkx8vhou9lZ5v0BsOGybCid+0D23dYF2/4WGQ8EsjzE9QghRhpXYsJMhc3e+UirPLv682kyZMoU33nhD/zwmJgZvb+8nK1SIHIRFJ/LVjgv8GHKDdK1Co4GeDSrxegd/Krnk45RTeqruCqudsyAlFtBAo6HQ7gOwcy3y+oUQorQrsWHH09MT0PXeVKxYUb88IiJC39vj6elJSkoKkZGRBr07ERERtGzZMsfXtra2xtrauogqF0LnfnwKC3ZfImjvFZLTtAC0f9qD/3SqkfddyTOE/qM7ZXXnjO75U43gxc/hqYZFVLUQQpieEjuVqq+vL56enmzfvl2/LCUlhd27d+uDTKNGjbC0tDRoExYWxsmTJ3MNO0IUpcj4FD774yytP/2LBX9fJjlNS1MfV37+vxYsGto4f0En8gr8MBSWddUFHVtXeOlrGLlDgo4QQjwmo/bsxMXFcfHiRf3z0NBQjh49iqurK5UrVyYwMJCZM2fi7++Pv78/M2fOxM7OjoEDBwLg7OzMyJEjmTx5Mm5ubri6uvLmm29Sp04d2rdvb6zdEmVUVEIKC/+5TNC/V4hP0U19UNvLickdq/NcjQp5X2EFkBQD/3wB+7+F9BRAA41HwPPvyykrIYQoIKOGnUOHDvHcc8/pn2eMoxk6dChBQUG89dZbJCYmMm7cOCIjI2nWrBnbtm3D0fHh/xnPnTsXCwsL+vbtS2JiIu3atSMoKAhzcxmwKYpHVEIKi/4JJWjvFeKS0wCoVdGJwPb++buMHHSXkh9ZDn99DAl3dct820CnmXKVlRBCPKESM8+OMck8O6Ig7sUls/TfKwYh5+kHIadjfkMOwMU/Yet7D8fluPnrbvNQvZPMfiyEELko9fPsCFFS3YxKZOHfl1kbfI2kVN3A45qejg9CjidmZvkMKBFnYdv7cPHBmDNbF2g7RXfaytyyiKoXQoiyR8KOEPl0MSKW73ZfZuORm6RpdR2iAU85Mb5tNTrVfoyQE3Udds2CY2t097Eys4Cmo+HZ/8i4HCGEKAISdoTIw7HrUXy76yLbTt8m46Rvi6pujHvOj2eqlc//6ar4e7rBx8ELHww+Bmp2hfbToXy1oileCCGEhB0hsqPVKv48G8HiPZfZf/m+fnnHWh78X1s/GlR2yWXrTJLjYP982Pu17j5WAD6tof00qNS4cAsXQgiRhYQdIR4Rn5zGTyE3WPpvKFfuJQBgYaahW30v/q+NH/4e+ZwMECAtBQ4vg92fQXyEbplnHV3I8Wsng4+FEKKYSNgRAt2g42V7r7Dm4DVik3RXVjnZWDCwWRWGtqxCRWfb/L9YWgocXQl/fwExN3TLXHzg+alQuyeYldi5PIUQwiRJ2BFlllKKg6H3Wb7/Kn+cDCf9waBj3/L2jGjlQ69GlbCzeow/kbQUOLpKNy4n+rpumYMnPPum7madFvm42acQQohCJ2FHlDkxSalsOHyTVQeucv52nH55Sz83Rj7jy3M1KuT/yirQ3ajz6CpdT070Nd0yBw945g1oNAwsbQp3B4QQQjwWCTuizDh5M5qV+6/yy9FbJKbqbudga2lOjwZevNLch1pejzmhZFoyHFsL/3wOUQ9Cjn0FeOZ1aDwcLB/j1JcQQogiI2FHmLT45DR+OxHGqgPXOHY9Sr/cv4IDg5tX4eWGT+Fk85gT+CXHQUgQ7PsfxN7SLbOvAM8EQqPhYGVXWOULIYQoBBJ2hMnJGIvzY8gNtpwII+HBTTktzTW8EFCRwc0q09TXNf/z42RIuA8HFsDBBZAYqVvmWBFaTNDNeiwhRwghSiQJO8Jk3IpK5OeQG/x0+AZXH1w2DuDjZkefxt70beyNu6P1479w9E3YN0/Xm5P64HVd/aDVa1CvP1gU4DWFEEIUGwk7olSLS05j++lw1h++yZ6Ld/UzHNtbmdOlbkX6NPamcRWXx+/FAQg7rpsM8MSPoE3VLfOsC63fgKe7gZl54e2IEEKIIiNhR5Q6Sanp7Dp3h83HbrHjzG2S07T6dc18XenT2JsX63g+3mXjGbRaOP8H7P8WrvzzcLlPa92YHJkMUAghSh0JO6JUSEvXsvfSPTYdu8XWk+HEJqfp1/mWt+elel70avgUVdzsC/YGyXG6y8cPfAf3L+uWacyhdg9oPk5u6yCEEKWYhB1RYiWnpbP30j22nQpn++nb3I1L0a/zdLLhpXoV6VbvKQKecirYaSqA+6FwaDGELIfkaN0yG2fd/DhNR4NzpSffESGEEEYlYUeUKHHJaew6F8HWU7fZdTbCoAfHxc6SF+tUpFs9L5r4uD7exH+P0qbD+a26kHPxT+DBQB9XP2j+f1BvAFg7PPnOCCGEKBEk7AijC49OYvf5CLadus0/F++S8sgYnAqO1nSo5UGn2p608HPD0vwJ7isVexsOL9ddVZVxzyoAv+eh6Rjw7yj3rRJCCBMkYUcUu9R0LSFXI9l17g67zkVwNjzWYL2Pmx2danvSsbYnDbzLFbwHB3QDjq/8A4eWwNlfQfugp8jWFRoM0k0C6Ob3BHsjhBCipJOwI4rFzahE9ly4w65zd9hz4a7B6SmNBupWKke7mhXoVNuT6h4OBR+DkyHyKhxboxt0nHErBwDvZtB4JNTqLvesEkKIMkLCjigSETFJ7Lt8j32X7rH30j2u3U8wWO9qb8Wz/uVpW6MCrf3L4+ZQCBPzpSTAmU1wZKXhZePWTlCnt26WY886T/4+QgghShUJO6JQ3I5J4tCVSPZdvsu+S/e4dCfeYL25mYa6lZxpU92dtjUqUOcpZ8yf5PRUBq0Wru/X9eKc3AApGafENFC1DdQfDDW7yK0chBCiDJOwIx5barqW07diOHwtksPXojh8NZKbUYkGbTQaqO3lRIuqbrTwc6OJjyuOj3vDzZwoBWHH4ORPuoDz6GBjFx+oP0h3G4dylQvn/YQQQpRqEnZErtK1itC78Zy6Fc2pWzEcvRbF8ZtRJKVqDdqZaaCGpxPNfF1p4edGM19XytlZFW4xdy/AiZ90IefexYfLrZ3g6Zeg/kCo3FKuqBJCCGFAwo7QS0pN52JEnD7YnLoVw5mwGP1dwx/lbGtJw8rlaFjZhYZVXKjnXQ4H60L+OCkFd87B2c1wehOEH3+4zsIGqr+gG4tTrYMMNhZCCJEjCTtlUFxyGpci4rgQEcfFiDguRsRyMSKOa/cT0Kqs7W0szXi6ohMBXs7UqeRMw8ouVC1v/2SXhOdEq4VbR3QDjc/+atiDY2YBVZ/TBZyaXcDasfDfXwghhMmRsGOClFLciUvm+v0Ert9P5Nr9BK7dT+D6g/+GRSfluK2zrSW1vZyo7eVEwFPO1PZywre8Q+EMJs5JWjJc3Qtnf9M9Ym89XGduBb5t4OmuUPMlsHcrujqEEEKYJAk7pUi6VhGTmEpkQgr34lO4HZNEeHQSEbHJBj+HRSdmGVOTWXkHa/wrOFCtggP+Hg5Uc3egmocD7g7WTz7HTX5EXoWL2+HCDgj9G1IfuXrLygH8O0DNrrpZjW2cir4eIYQQJkvCThG6cjee2zFJpGsV6UqRplWkp+v+q1WK1HQtSanpJKToHokp6cSnpJH44HlMUiqRCalEJaQQlZBKTFIqKpvTTNnRaMDL2RZvV1u8Xeyo7GpHZTc7KrnYUc3dAWe7QroyKr9Sk+DaPri4Ay5sg7vnDdc7eOiCzdMv6XpyZAyOEEKIQiJhpwgt+PsSaw5eL/TXdbS2wNXBCg9HGzycbfBwtMbDyYYKTrr/ejrZ4FXOFisLI16VlJYCtw5D6D8QuhtuBEPaI6fPNObg3RSqtdf14njUkauohBBCFAkJO0XI3dGGqu72WJhpMDczw8JMg5mZ5sFzDeYaDbZW5thamWNnaY69tYX+Z1src5xsLClnZ4mLvRUudpY421pRzs7yyW6GWVTSUyHsOFz5Wxdwru2DVMNZk3HwfBBu2usGGtuWM0qpQgghyhaNUvk9MWK6YmJicHZ2Jjo6GicnGR+SL3ERcP0g3DgI14N1V1ClGU4siJ0b+DwDvs+Cz7NQ3l93fk0IIYQoBPn9/paeHZG35Di4fVI3a/GNQ7qAE3klazubclCllS7c+LYG96fl1JQQQgijk7AjDMXfg/BjulNS4cd1AefeJSBzB6AG3Gvqxt14N9XdTdytmvTcCCGEKHEk7JRFSkH8Hd3sxHfO6q6MunMW7pyHuPDst3HwhIr1wKuBLtxUagw2zsVbtxBCCFEAJhN2vv32W2bPnk1YWBi1a9fmyy+/pHXr1sYuy3i0Wl1wibyqO+UUeQWirsL9ULh7DhIjc97WxRcq1tWFG896up8dKhRX5UIIIUShMomws27dOgIDA/n2229p1aoVCxYsoHPnzpw+fZrKlU3wztepSbqemdhwiA178N9bD59H34Soa5CenMuLaMCliu5UVPnq4F7j4c8yiZ8QQggTYhJXYzVr1oyGDRsyf/58/bKnn36aHj16MGvWrDy3L7KrsRLuQ3IsqHTQpoM2Let/UxN0j5QE3SzCKfEPf06K1r1G4n1IiNT9NzEy6yXdOdGYg3MlcPF55FFFF2jcqoGlbeHtqxBCCFHMyszVWCkpKYSEhPDOO+8YLO/YsSN79+7Ndpvk5GSSkx/2esTExBRNcTumweFlRfPaZpbg6AmOFbP+16miLtg4VQLzUn+IhRBCiCdS6r8J7969S3p6Oh4eHgbLPTw8CA/PfrDtrFmzmD59etEXZ2ENFja6u3Wbmev+q3nwXzML3WXZlnZgZZ/1v1b2YO0Edq5g6wq2LmDnovuvratunVzWLYQQQuSp1IedDJlvXqmUyvGGllOmTOGNN97QP4+JicHb27vwi3pxtu4hhBBCCKMp9WGnfPnymJubZ+nFiYiIyNLbk8Ha2hpra+viKE8IIYQQRlbqz4NYWVnRqFEjtm/fbrB8+/bttGzZ0khVCSGEEKKkKPU9OwBvvPEGr7zyCo0bN6ZFixZ8//33XLt2jbFjxxq7NCGEEEIYmUmEnX79+nHv3j1mzJhBWFgYAQEBbNmyhSpVqhi7NCGEEEIYmUnMs/Ok5K7nQgghROmT3+/vUj9mRwghhBAiNxJ2hBBCCGHSJOwIIYQQwqRJ2BFCCCGESZOwI4QQQgiTJmFHCCGEECZNwo4QQgghTJqEHSGEEEKYNAk7QgghhDBpJnG7iCeVMYl0TEyMkSsRQgghRH5lfG/ndTMICTtAbGwsAN7e3kauRAghhBCPKzY2Fmdn5xzXy72xAK1Wy61bt3B0dESj0RTa68bExODt7c3169dN9p5bpr6Ppr5/YPr7KPtX+pn6Psr+FZxSitjYWLy8vDAzy3lkjvTsAGZmZlSqVKnIXt/JyckkP8CPMvV9NPX9A9PfR9m/0s/U91H2r2By69HJIAOUhRBCCGHSJOwIIYQQwqRJ2ClC1tbWfPDBB1hbWxu7lCJj6vto6vsHpr+Psn+ln6nvo+xf0ZMBykIIIYQwadKzI4QQQgiTJmFHCCGEECZNwo4QQgghTJqEHSGEEEKYNAk7Rejbb7/F19cXGxsbGjVqxD///GPskgpk1qxZNGnSBEdHRypUqECPHj04d+6cQZthw4ah0WgMHs2bNzdSxY9n2rRpWWr39PTUr1dKMW3aNLy8vLC1taVt27acOnXKiBU/Ph8fnyz7qNFoGD9+PFD6jt/ff//NSy+9hJeXFxqNho0bNxqsz88xS05OZuLEiZQvXx57e3u6devGjRs3inEvcpfbPqampvL2229Tp04d7O3t8fLyYsiQIdy6dcvgNdq2bZvluPbv37+Y9yR7eR3D/HwmS/IxzGv/svt71Gg0zJ49W9+mJB+//HwvlKS/Qwk7RWTdunUEBgby3nvvceTIEVq3bk3nzp25du2asUt7bLt372b8+PHs37+f7du3k5aWRseOHYmPjzdo98ILLxAWFqZ/bNmyxUgVP77atWsb1H7ixAn9us8++4w5c+Ywb948goOD8fT0pEOHDvp7qpUGwcHBBvu3fft2APr06aNvU5qOX3x8PPXq1WPevHnZrs/PMQsMDGTDhg2sXbuWPXv2EBcXR9euXUlPTy+u3chVbvuYkJDA4cOHmTp1KocPH2b9+vWcP3+ebt26ZWk7atQog+O6YMGC4ig/T3kdQ8j7M1mSj2Fe+/fofoWFhbFkyRI0Gg29evUyaFdSj19+vhdK1N+hEkWiadOmauzYsQbLatasqd555x0jVVR4IiIiFKB2796tXzZ06FDVvXt34xX1BD744ANVr169bNdptVrl6empPvnkE/2ypKQk5ezsrL777rtiqrDwvfbaa8rPz09ptVqlVOk+foDasGGD/nl+jllUVJSytLRUa9eu1be5efOmMjMzU3/88Uex1Z5fmfcxOwcPHlSAunr1qn5ZmzZt1GuvvVa0xRWC7PYvr89kaTqG+Tl+3bt3V88//7zBstJy/JTK+r1Q0v4OpWenCKSkpBASEkLHjh0Nlnfs2JG9e/caqarCEx0dDYCrq6vB8l27dlGhQgWqV6/OqFGjiIiIMEZ5BXLhwgW8vLzw9fWlf//+XL58GYDQ0FDCw8MNjqW1tTVt2rQptccyJSWFlStXMmLECIMb35bm4/eo/ByzkJAQUlNTDdp4eXkREBBQao9rdHQ0Go2GcuXKGSxftWoV5cuXp3bt2rz55pulqkcyt8+kKR3D27dv89tvvzFy5Mgs60rL8cv8vVDS/g7lRqBF4O7du6Snp+Ph4WGw3MPDg/DwcCNVVTiUUrzxxhs888wzBAQE6Jd37tyZPn36UKVKFUJDQ5k6dSrPP/88ISEhJX5W0GbNmrF8+XKqV6/O7du3+eijj2jZsiWnTp3SH6/sjuXVq1eNUe4T27hxI1FRUQwbNky/rDQfv8zyc8zCw8OxsrLCxcUlS5vS+DealJTEO++8w8CBAw1utDho0CB8fX3x9PTk5MmTTJkyhWPHjulPY5ZkeX0mTekYLlu2DEdHR3r27GmwvLQcv+y+F0ra36GEnSL06P81g+4DkXlZaTNhwgSOHz/Onj17DJb369dP/3NAQACNGzemSpUq/Pbbb1n+gEuazp0763+uU6cOLVq0wM/Pj2XLlukHRJrSsVy8eDGdO3fGy8tLv6w0H7+cFOSYlcbjmpqaSv/+/dFqtXz77bcG60aNGqX/OSAgAH9/fxo3bszhw4dp2LBhcZf6WAr6mSyNx3DJkiUMGjQIGxsbg+Wl5fjl9L0AJefvUE5jFYHy5ctjbm6eJZlGRERkSbmlycSJE9m0aRM7d+6kUqVKubatWLEiVapU4cKFC8VUXeGxt7enTp06XLhwQX9Vlqkcy6tXr7Jjxw5effXVXNuV5uOXn2Pm6elJSkoKkZGRObYpDVJTU+nbty+hoaFs377doFcnOw0bNsTS0rJUHtfMn0lTOYb//PMP586dy/NvEkrm8cvpe6Gk/R1K2CkCVlZWNGrUKEtX4/bt22nZsqWRqio4pRQTJkxg/fr1/PXXX/j6+ua5zb1797h+/ToVK1YshgoLV3JyMmfOnKFixYr6LuRHj2VKSgq7d+8ulcdy6dKlVKhQgS5duuTarjQfv/wcs0aNGmFpaWnQJiwsjJMnT5aa45oRdC5cuMCOHTtwc3PLc5tTp06RmppaKo9r5s+kKRxD0PW0NmrUiHr16uXZtiQdv7y+F0rc32GhDncWemvXrlWWlpZq8eLF6vTp0yowMFDZ29urK1euGLu0x/Z///d/ytnZWe3atUuFhYXpHwkJCUoppWJjY9XkyZPV3r17VWhoqNq5c6dq0aKFeuqpp1RMTIyRq8/b5MmT1a5du9Tly5fV/v37VdeuXZWjo6P+WH3yySfK2dlZrV+/Xp04cUINGDBAVaxYsVTs26PS09NV5cqV1dtvv22wvDQev9jYWHXkyBF15MgRBag5c+aoI0eO6K9Eys8xGzt2rKpUqZLasWOHOnz4sHr++edVvXr1VFpamrF2y0Bu+5iamqq6deumKlWqpI4ePWrwd5mcnKyUUurixYtq+vTpKjg4WIWGhqrffvtN1axZUzVo0KBE7GNu+5ffz2RJPoZ5fUaVUio6OlrZ2dmp+fPnZ9m+pB+/vL4XlCpZf4cSdorQ//73P1WlShVlZWWlGjZsaHCpdmkCZPtYunSpUkqphIQE1bFjR+Xu7q4sLS1V5cqV1dChQ9W1a9eMW3g+9evXT1WsWFFZWloqLy8v1bNnT3Xq1Cn9eq1Wqz744APl6emprK2t1bPPPqtOnDhhxIoLZuvWrQpQ586dM1heGo/fzp07s/1MDh06VCmVv2OWmJioJkyYoFxdXZWtra3q2rVridrn3PYxNDQ0x7/LnTt3KqWUunbtmnr22WeVq6ursrKyUn5+fmrSpEnq3r17xt2xB3Lbv/x+JkvyMczrM6qUUgsWLFC2trYqKioqy/Yl/fjl9b2gVMn6O9Q8KFoIIYQQwiTJmB0hhBBCmDQJO0IIIYQwaRJ2hBBCCGHSJOwIIYQQwqRJ2BFCCCGESZOwI4QQQgiTJmFHCCGEECZNwo4QotTatWsXGo2GqKgoY5cihCjBZFJBIUSp0bZtW+rXr8+XX34J6O61c//+fTw8PErdna6FEMXHwtgFCCFEQVlZWenvriyEEDmR01hCiFJh2LBh7N69m6+++gqNRoNGoyEoKMjgNFZQUBDlypXj119/pUaNGtjZ2dG7d2/i4+NZtmwZPj4+uLi4MHHiRNLT0/WvnZKSwltvvcVTTz2Fvb09zZo1Y9euXcbZUSFEoZOeHSFEqfDVV19x/vx5AgICmDFjBgCnTp3K0i4hIYGvv/6atWvXEhsbS8+ePenZsyflypVjy5YtXL58mV69evHMM8/Qr18/AIYPH86VK1dYu3YtXl5ebNiwgRdeeIETJ07g7+9frPsphCh8EnaEEKWCs7MzVlZW2NnZ6U9dnT17Nku71NRU5s+fj5+fHwC9e/dmxYoV3L59GwcHB2rVqsVzzz3Hzp076devH5cuXWLNmjXcuHEDLy8vAN58803++OMPli5dysyZM4tvJ4UQRULCjhDCpNjZ2emDDoCHhwc+Pj44ODgYLIuIiADg8OHDKKWoXr26weskJyfj5uZWPEULIYqUhB0hhEmxtLQ0eK7RaLJdptVqAdBqtZibmxMSEoK5ublBu0cDkhCi9JKwI4QoNaysrAwGFheGBg0akJ6eTkREBK1bty7U1xZClAxyNZYQotTw8fHhwIEDXLlyhbt37+p7Z55E9erVGTRoEEOGDGH9+vWEhoYSHBzMp59+ypYtWwqhaiGEsUnYEUKUGm+++Sbm5ubUqlULd3d3rl27Viivu3TpUoYMGcLkyZOpUaMG3bp148CBA3h7exfK6wshjEtmUBZCCCGESZOeHSGEEEKYNAk7QgghhDBpEnaEEEIIYdIk7AghhBDCpEnYEUIIIYRJk7AjhBBCCJMmYUcIIYQQJk3CjhBCCCFMmoQdIYQQQpg0CTtCCCGEMGkSdoQQQghh0iTsCCGEEMKk/T+ZeNXXsO3FDgAAAABJRU5ErkJggg==",
      "text/plain": [
       "<Figure size 640x480 with 1 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "construct_3 = DNA_construct([[ptet,\"forward\"],[utr1,\"forward\"],[gfp,\"forward\"],[t16,\"forward\"],[t16,\"reverse\"],[rfp,\"reverse\"],[utr1,\"reverse\"],[pconst,\"reverse\"]])\n",
    "#now, we are using dnaplotlib to plot the constructs\n",
    "\n",
    "if(dpl_enabled):\n",
    "    render_constructs([construct_3])\n",
    "\n",
    "#some very basic parameters are defined\n",
    "parameters={\"cooperativity\":2,\"kb\":100, \"ku\":10, \"ktx\":.05, \"ktl\":.2, \"kdeg\":2,\"kint\":.05}\n",
    "\n",
    "components = [construct_3]\n",
    "myMixture = TxTlExtract(name = \"txtl\", parameters = parameters, components = components)\n",
    "myCRN = myMixture.compile_crn()\n",
    "''\n",
    "try:\n",
    "    import numpy as np\n",
    "    import matplotlib.pyplot as plt\n",
    "    timepoints = np.linspace(0, 200, 1000)\n",
    "    x0 = {construct_3.get_species():5.0, \"protein_GFP\":20,\"protein_RNAP\":10., \"protein_Ribo\":50.,\"protein_arac\":20}\n",
    "    #I started the GFP at a slightly elevated value so you can see the two lines on top of each other in the graph\n",
    "    Re1 = myCRN.simulate_with_bioscrape_via_sbml(timepoints, initial_condition_dict = x0)\n",
    "    if(Re1 is not None):\n",
    "        plt.figure()\n",
    "        plt.plot(timepoints,Re1[\"protein_GFP\"], label = \"protein_GFP\")\n",
    "        plt.plot(timepoints,Re1[\"protein_RFP\"], label = \"protein_RFP\")\n",
    "        #plt.plot(timepoints,Re1[\"rna_mydna\"], label = \"rna_mydna\")\n",
    "        #plt.gca().set_yscale(\"log\")\n",
    "        plt.title(\"Time trace of single DNA system\")\n",
    "        plt.xlabel(\"time\")\n",
    "        plt.ylabel(\"protein\")\n",
    "        plt.legend()\n",
    "        \n",
    "except ModuleNotFoundError:\n",
    "    print('please install the plotting libraries: pip install biocrnpyler[all]')\n",
    "#'''"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "The same RNAs and proteins are made, but the network diagram should be a bit more complicated, owing to the combinatorial binding to the DNA molecule"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "metadata": {
    "tags": []
   },
   "outputs": [
    {
     "data": {
      "text/html": [
       "    <style>\n",
       "        .bk-notebook-logo {\n",
       "            display: block;\n",
       "            width: 20px;\n",
       "            height: 20px;\n",
       "            background-image: url(data:image/png;base64,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);\n",
       "        }\n",
       "    </style>\n",
       "    <div>\n",
       "        <a href=\"https://bokeh.org\" target=\"_blank\" class=\"bk-notebook-logo\"></a>\n",
       "        <span id=\"a31efe3f-4b64-4753-ac26-2c804c741621\">Loading BokehJS ...</span>\n",
       "    </div>\n"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "'use strict';\n",
       "(function(root) {\n",
       "  function now() {\n",
       "    return new Date();\n",
       "  }\n",
       "\n",
       "  const force = true;\n",
       "\n",
       "  if (typeof root._bokeh_onload_callbacks === \"undefined\" || force === true) {\n",
       "    root._bokeh_onload_callbacks = [];\n",
       "    root._bokeh_is_loading = undefined;\n",
       "  }\n",
       "\n",
       "const JS_MIME_TYPE = 'application/javascript';\n",
       "  const HTML_MIME_TYPE = 'text/html';\n",
       "  const EXEC_MIME_TYPE = 'application/vnd.bokehjs_exec.v0+json';\n",
       "  const CLASS_NAME = 'output_bokeh rendered_html';\n",
       "\n",
       "  /**\n",
       "   * Render data to the DOM node\n",
       "   */\n",
       "  function render(props, node) {\n",
       "    const script = document.createElement(\"script\");\n",
       "    node.appendChild(script);\n",
       "  }\n",
       "\n",
       "  /**\n",
       "   * Handle when an output is cleared or removed\n",
       "   */\n",
       "  function handleClearOutput(event, handle) {\n",
       "    function drop(id) {\n",
       "      const view = Bokeh.index.get_by_id(id)\n",
       "      if (view != null) {\n",
       "        view.model.document.clear()\n",
       "        Bokeh.index.delete(view)\n",
       "      }\n",
       "    }\n",
       "\n",
       "    const cell = handle.cell;\n",
       "\n",
       "    const id = cell.output_area._bokeh_element_id;\n",
       "    const server_id = cell.output_area._bokeh_server_id;\n",
       "\n",
       "    // Clean up Bokeh references\n",
       "    if (id != null) {\n",
       "      drop(id)\n",
       "    }\n",
       "\n",
       "    if (server_id !== undefined) {\n",
       "      // Clean up Bokeh references\n",
       "      const cmd_clean = \"from bokeh.io.state import curstate; print(curstate().uuid_to_server['\" + server_id + \"'].get_sessions()[0].document.roots[0]._id)\";\n",
       "      cell.notebook.kernel.execute(cmd_clean, {\n",
       "        iopub: {\n",
       "          output: function(msg) {\n",
       "            const id = msg.content.text.trim()\n",
       "            drop(id)\n",
       "          }\n",
       "        }\n",
       "      });\n",
       "      // Destroy server and session\n",
       "      const cmd_destroy = \"import bokeh.io.notebook as ion; ion.destroy_server('\" + server_id + \"')\";\n",
       "      cell.notebook.kernel.execute(cmd_destroy);\n",
       "    }\n",
       "  }\n",
       "\n",
       "  /**\n",
       "   * Handle when a new output is added\n",
       "   */\n",
       "  function handleAddOutput(event, handle) {\n",
       "    const output_area = handle.output_area;\n",
       "    const output = handle.output;\n",
       "\n",
       "    // limit handleAddOutput to display_data with EXEC_MIME_TYPE content only\n",
       "    if ((output.output_type != \"display_data\") || (!Object.prototype.hasOwnProperty.call(output.data, EXEC_MIME_TYPE))) {\n",
       "      return\n",
       "    }\n",
       "\n",
       "    const toinsert = output_area.element.find(\".\" + CLASS_NAME.split(' ')[0]);\n",
       "\n",
       "    if (output.metadata[EXEC_MIME_TYPE][\"id\"] !== undefined) {\n",
       "      toinsert[toinsert.length - 1].firstChild.textContent = output.data[JS_MIME_TYPE];\n",
       "      // store reference to embed id on output_area\n",
       "      output_area._bokeh_element_id = output.metadata[EXEC_MIME_TYPE][\"id\"];\n",
       "    }\n",
       "    if (output.metadata[EXEC_MIME_TYPE][\"server_id\"] !== undefined) {\n",
       "      const bk_div = document.createElement(\"div\");\n",
       "      bk_div.innerHTML = output.data[HTML_MIME_TYPE];\n",
       "      const script_attrs = bk_div.children[0].attributes;\n",
       "      for (let i = 0; i < script_attrs.length; i++) {\n",
       "        toinsert[toinsert.length - 1].firstChild.setAttribute(script_attrs[i].name, script_attrs[i].value);\n",
       "        toinsert[toinsert.length - 1].firstChild.textContent = bk_div.children[0].textContent\n",
       "      }\n",
       "      // store reference to server id on output_area\n",
       "      output_area._bokeh_server_id = output.metadata[EXEC_MIME_TYPE][\"server_id\"];\n",
       "    }\n",
       "  }\n",
       "\n",
       "  function register_renderer(events, OutputArea) {\n",
       "\n",
       "    function append_mime(data, metadata, element) {\n",
       "      // create a DOM node to render to\n",
       "      const toinsert = this.create_output_subarea(\n",
       "        metadata,\n",
       "        CLASS_NAME,\n",
       "        EXEC_MIME_TYPE\n",
       "      );\n",
       "      this.keyboard_manager.register_events(toinsert);\n",
       "      // Render to node\n",
       "      const props = {data: data, metadata: metadata[EXEC_MIME_TYPE]};\n",
       "      render(props, toinsert[toinsert.length - 1]);\n",
       "      element.append(toinsert);\n",
       "      return toinsert\n",
       "    }\n",
       "\n",
       "    /* Handle when an output is cleared or removed */\n",
       "    events.on('clear_output.CodeCell', handleClearOutput);\n",
       "    events.on('delete.Cell', handleClearOutput);\n",
       "\n",
       "    /* Handle when a new output is added */\n",
       "    events.on('output_added.OutputArea', handleAddOutput);\n",
       "\n",
       "    /**\n",
       "     * Register the mime type and append_mime function with output_area\n",
       "     */\n",
       "    OutputArea.prototype.register_mime_type(EXEC_MIME_TYPE, append_mime, {\n",
       "      /* Is output safe? */\n",
       "      safe: true,\n",
       "      /* Index of renderer in `output_area.display_order` */\n",
       "      index: 0\n",
       "    });\n",
       "  }\n",
       "\n",
       "  // register the mime type if in Jupyter Notebook environment and previously unregistered\n",
       "  if (root.Jupyter !== undefined) {\n",
       "    const events = require('base/js/events');\n",
       "    const OutputArea = require('notebook/js/outputarea').OutputArea;\n",
       "\n",
       "    if (OutputArea.prototype.mime_types().indexOf(EXEC_MIME_TYPE) == -1) {\n",
       "      register_renderer(events, OutputArea);\n",
       "    }\n",
       "  }\n",
       "  if (typeof (root._bokeh_timeout) === \"undefined\" || force === true) {\n",
       "    root._bokeh_timeout = Date.now() + 5000;\n",
       "    root._bokeh_failed_load = false;\n",
       "  }\n",
       "\n",
       "  const NB_LOAD_WARNING = {'data': {'text/html':\n",
       "     \"<div style='background-color: #fdd'>\\n\"+\n",
       "     \"<p>\\n\"+\n",
       "     \"BokehJS does not appear to have successfully loaded. If loading BokehJS from CDN, this \\n\"+\n",
       "     \"may be due to a slow or bad network connection. Possible fixes:\\n\"+\n",
       "     \"</p>\\n\"+\n",
       "     \"<ul>\\n\"+\n",
       "     \"<li>re-rerun `output_notebook()` to attempt to load from CDN again, or</li>\\n\"+\n",
       "     \"<li>use INLINE resources instead, as so:</li>\\n\"+\n",
       "     \"</ul>\\n\"+\n",
       "     \"<code>\\n\"+\n",
       "     \"from bokeh.resources import INLINE\\n\"+\n",
       "     \"output_notebook(resources=INLINE)\\n\"+\n",
       "     \"</code>\\n\"+\n",
       "     \"</div>\"}};\n",
       "\n",
       "  function display_loaded(error = null) {\n",
       "    const el = document.getElementById(\"a31efe3f-4b64-4753-ac26-2c804c741621\");\n",
       "    if (el != null) {\n",
       "      const html = (() => {\n",
       "        if (typeof root.Bokeh === \"undefined\") {\n",
       "          if (error == null) {\n",
       "            return \"BokehJS is loading ...\";\n",
       "          } else {\n",
       "            return \"BokehJS failed to load.\";\n",
       "          }\n",
       "        } else {\n",
       "          const prefix = `BokehJS ${root.Bokeh.version}`;\n",
       "          if (error == null) {\n",
       "            return `${prefix} successfully loaded.`;\n",
       "          } else {\n",
       "            return `${prefix} <b>encountered errors</b> while loading and may not function as expected.`;\n",
       "          }\n",
       "        }\n",
       "      })();\n",
       "      el.innerHTML = html;\n",
       "\n",
       "      if (error != null) {\n",
       "        const wrapper = document.createElement(\"div\");\n",
       "        wrapper.style.overflow = \"auto\";\n",
       "        wrapper.style.height = \"5em\";\n",
       "        wrapper.style.resize = \"vertical\";\n",
       "        const content = document.createElement(\"div\");\n",
       "        content.style.fontFamily = \"monospace\";\n",
       "        content.style.whiteSpace = \"pre-wrap\";\n",
       "        content.style.backgroundColor = \"rgb(255, 221, 221)\";\n",
       "        content.textContent = error.stack ?? error.toString();\n",
       "        wrapper.append(content);\n",
       "        el.append(wrapper);\n",
       "      }\n",
       "    } else if (Date.now() < root._bokeh_timeout) {\n",
       "      setTimeout(() => display_loaded(error), 100);\n",
       "    }\n",
       "  }\n",
       "\n",
       "  function run_callbacks() {\n",
       "    try {\n",
       "      root._bokeh_onload_callbacks.forEach(function(callback) {\n",
       "        if (callback != null)\n",
       "          callback();\n",
       "      });\n",
       "    } finally {\n",
       "      delete root._bokeh_onload_callbacks\n",
       "    }\n",
       "    console.debug(\"Bokeh: all callbacks have finished\");\n",
       "  }\n",
       "\n",
       "  function load_libs(css_urls, js_urls, callback) {\n",
       "    if (css_urls == null) css_urls = [];\n",
       "    if (js_urls == null) js_urls = [];\n",
       "\n",
       "    root._bokeh_onload_callbacks.push(callback);\n",
       "    if (root._bokeh_is_loading > 0) {\n",
       "      console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n",
       "      return null;\n",
       "    }\n",
       "    if (js_urls == null || js_urls.length === 0) {\n",
       "      run_callbacks();\n",
       "      return null;\n",
       "    }\n",
       "    console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n",
       "    root._bokeh_is_loading = css_urls.length + js_urls.length;\n",
       "\n",
       "    function on_load() {\n",
       "      root._bokeh_is_loading--;\n",
       "      if (root._bokeh_is_loading === 0) {\n",
       "        console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n",
       "        run_callbacks()\n",
       "      }\n",
       "    }\n",
       "\n",
       "    function on_error(url) {\n",
       "      console.error(\"failed to load \" + url);\n",
       "    }\n",
       "\n",
       "    for (let i = 0; i < css_urls.length; i++) {\n",
       "      const url = css_urls[i];\n",
       "      const element = document.createElement(\"link\");\n",
       "      element.onload = on_load;\n",
       "      element.onerror = on_error.bind(null, url);\n",
       "      element.rel = \"stylesheet\";\n",
       "      element.type = \"text/css\";\n",
       "      element.href = url;\n",
       "      console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n",
       "      document.body.appendChild(element);\n",
       "    }\n",
       "\n",
       "    for (let i = 0; i < js_urls.length; i++) {\n",
       "      const url = js_urls[i];\n",
       "      const element = document.createElement('script');\n",
       "      element.onload = on_load;\n",
       "      element.onerror = on_error.bind(null, url);\n",
       "      element.async = false;\n",
       "      element.src = url;\n",
       "      console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n",
       "      document.head.appendChild(element);\n",
       "    }\n",
       "  };\n",
       "\n",
       "  function inject_raw_css(css) {\n",
       "    const element = document.createElement(\"style\");\n",
       "    element.appendChild(document.createTextNode(css));\n",
       "    document.body.appendChild(element);\n",
       "  }\n",
       "\n",
       "  const js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-gl-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-mathjax-3.7.3.min.js\"];\n",
       "  const css_urls = [];\n",
       "\n",
       "  const inline_js = [    function(Bokeh) {\n",
       "      Bokeh.set_log_level(\"info\");\n",
       "    },\n",
       "function(Bokeh) {\n",
       "    }\n",
       "  ];\n",
       "\n",
       "  function run_inline_js() {\n",
       "    if (root.Bokeh !== undefined || force === true) {\n",
       "      try {\n",
       "            for (let i = 0; i < inline_js.length; i++) {\n",
       "      inline_js[i].call(root, root.Bokeh);\n",
       "    }\n",
       "\n",
       "      } catch (error) {display_loaded(error);throw error;\n",
       "      }if (force === true) {\n",
       "        display_loaded();\n",
       "      }} else if (Date.now() < root._bokeh_timeout) {\n",
       "      setTimeout(run_inline_js, 100);\n",
       "    } else if (!root._bokeh_failed_load) {\n",
       "      console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n",
       "      root._bokeh_failed_load = true;\n",
       "    } else if (force !== true) {\n",
       "      const cell = $(document.getElementById(\"a31efe3f-4b64-4753-ac26-2c804c741621\")).parents('.cell').data().cell;\n",
       "      cell.output_area.append_execute_result(NB_LOAD_WARNING)\n",
       "    }\n",
       "  }\n",
       "\n",
       "  if (root._bokeh_is_loading === 0) {\n",
       "    console.debug(\"Bokeh: BokehJS loaded, going straight to plotting\");\n",
       "    run_inline_js();\n",
       "  } else {\n",
       "    load_libs(css_urls, js_urls, function() {\n",
       "      console.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n",
       "      run_inline_js();\n",
       "    });\n",
       "  }\n",
       "}(window));"
      ],
      "application/vnd.bokehjs_load.v0+json": "'use strict';\n(function(root) {\n  function now() {\n    return new Date();\n  }\n\n  const force = true;\n\n  if (typeof root._bokeh_onload_callbacks === \"undefined\" || force === true) {\n    root._bokeh_onload_callbacks = [];\n    root._bokeh_is_loading = undefined;\n  }\n\n\n  if (typeof (root._bokeh_timeout) === \"undefined\" || force === true) {\n    root._bokeh_timeout = Date.now() + 5000;\n    root._bokeh_failed_load = false;\n  }\n\n  const NB_LOAD_WARNING = {'data': {'text/html':\n     \"<div style='background-color: #fdd'>\\n\"+\n     \"<p>\\n\"+\n     \"BokehJS does not appear to have successfully loaded. If loading BokehJS from CDN, this \\n\"+\n     \"may be due to a slow or bad network connection. Possible fixes:\\n\"+\n     \"</p>\\n\"+\n     \"<ul>\\n\"+\n     \"<li>re-rerun `output_notebook()` to attempt to load from CDN again, or</li>\\n\"+\n     \"<li>use INLINE resources instead, as so:</li>\\n\"+\n     \"</ul>\\n\"+\n     \"<code>\\n\"+\n     \"from bokeh.resources import INLINE\\n\"+\n     \"output_notebook(resources=INLINE)\\n\"+\n     \"</code>\\n\"+\n     \"</div>\"}};\n\n  function display_loaded(error = null) {\n    const el = document.getElementById(\"a31efe3f-4b64-4753-ac26-2c804c741621\");\n    if (el != null) {\n      const html = (() => {\n        if (typeof root.Bokeh === \"undefined\") {\n          if (error == null) {\n            return \"BokehJS is loading ...\";\n          } else {\n            return \"BokehJS failed to load.\";\n          }\n        } else {\n          const prefix = `BokehJS ${root.Bokeh.version}`;\n          if (error == null) {\n            return `${prefix} successfully loaded.`;\n          } else {\n            return `${prefix} <b>encountered errors</b> while loading and may not function as expected.`;\n          }\n        }\n      })();\n      el.innerHTML = html;\n\n      if (error != null) {\n        const wrapper = document.createElement(\"div\");\n        wrapper.style.overflow = \"auto\";\n        wrapper.style.height = \"5em\";\n        wrapper.style.resize = \"vertical\";\n        const content = document.createElement(\"div\");\n        content.style.fontFamily = \"monospace\";\n        content.style.whiteSpace = \"pre-wrap\";\n        content.style.backgroundColor = \"rgb(255, 221, 221)\";\n        content.textContent = error.stack ?? error.toString();\n        wrapper.append(content);\n        el.append(wrapper);\n      }\n    } else if (Date.now() < root._bokeh_timeout) {\n      setTimeout(() => display_loaded(error), 100);\n    }\n  }\n\n  function run_callbacks() {\n    try {\n      root._bokeh_onload_callbacks.forEach(function(callback) {\n        if (callback != null)\n          callback();\n      });\n    } finally {\n      delete root._bokeh_onload_callbacks\n    }\n    console.debug(\"Bokeh: all callbacks have finished\");\n  }\n\n  function load_libs(css_urls, js_urls, callback) {\n    if (css_urls == null) css_urls = [];\n    if (js_urls == null) js_urls = [];\n\n    root._bokeh_onload_callbacks.push(callback);\n    if (root._bokeh_is_loading > 0) {\n      console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n      return null;\n    }\n    if (js_urls == null || js_urls.length === 0) {\n      run_callbacks();\n      return null;\n    }\n    console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n    root._bokeh_is_loading = css_urls.length + js_urls.length;\n\n    function on_load() {\n      root._bokeh_is_loading--;\n      if (root._bokeh_is_loading === 0) {\n        console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n        run_callbacks()\n      }\n    }\n\n    function on_error(url) {\n      console.error(\"failed to load \" + url);\n    }\n\n    for (let i = 0; i < css_urls.length; i++) {\n      const url = css_urls[i];\n      const element = document.createElement(\"link\");\n      element.onload = on_load;\n      element.onerror = on_error.bind(null, url);\n      element.rel = \"stylesheet\";\n      element.type = \"text/css\";\n      element.href = url;\n      console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n      document.body.appendChild(element);\n    }\n\n    for (let i = 0; i < js_urls.length; i++) {\n      const url = js_urls[i];\n      const element = document.createElement('script');\n      element.onload = on_load;\n      element.onerror = on_error.bind(null, url);\n      element.async = false;\n      element.src = url;\n      console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n      document.head.appendChild(element);\n    }\n  };\n\n  function inject_raw_css(css) {\n    const element = document.createElement(\"style\");\n    element.appendChild(document.createTextNode(css));\n    document.body.appendChild(element);\n  }\n\n  const js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-gl-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-mathjax-3.7.3.min.js\"];\n  const css_urls = [];\n\n  const inline_js = [    function(Bokeh) {\n      Bokeh.set_log_level(\"info\");\n    },\nfunction(Bokeh) {\n    }\n  ];\n\n  function run_inline_js() {\n    if (root.Bokeh !== undefined || force === true) {\n      try {\n            for (let i = 0; i < inline_js.length; i++) {\n      inline_js[i].call(root, root.Bokeh);\n    }\n\n      } catch (error) {display_loaded(error);throw error;\n      }if (force === true) {\n        display_loaded();\n      }} else if (Date.now() < root._bokeh_timeout) {\n      setTimeout(run_inline_js, 100);\n    } else if (!root._bokeh_failed_load) {\n      console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n      root._bokeh_failed_load = true;\n    } else if (force !== true) {\n      const cell = $(document.getElementById(\"a31efe3f-4b64-4753-ac26-2c804c741621\")).parents('.cell').data().cell;\n      cell.output_area.append_execute_result(NB_LOAD_WARNING)\n    }\n  }\n\n  if (root._bokeh_is_loading === 0) {\n    console.debug(\"Bokeh: BokehJS loaded, going straight to plotting\");\n    run_inline_js();\n  } else {\n    load_libs(css_urls, js_urls, function() {\n      console.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n      run_inline_js();\n    });\n  }\n}(window));"
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     "output_type": "stream",
     "text": [
      "/Users/murray/Library/CloudStorage/Dropbox/macosx/src/biocrnpyler/biocrnpyler/utils/plotting.py:203: UserWarning: Node keys in 'layout_function' don't match node keys in the graph. These nodes may not be displayed correctly.\n",
      "  reaction_renderer = from_networkx(DGreactions, positions, center=(0, 0))\n",
      "/Users/murray/Library/CloudStorage/Dropbox/macosx/src/biocrnpyler/biocrnpyler/utils/plotting.py:204: UserWarning: Node keys in 'layout_function' don't match node keys in the graph. These nodes may not be displayed correctly.\n",
      "  species_renderer = from_networkx(DGspecies, positions, center=(0, 0))\n"
     ]
    },
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in default.]\",\"protein[RNAP in default.]\",\"protein[Ribo in default.]\",\"protein[RNAase in default.]\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse] in default.]\",\"rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse] in default.]\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse] in default.]\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse] in default.]\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse] in default.]\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse] in default.]\",\"ordered_polymer[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse] in default.]\",\"rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"protein[tetr in default.]\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"protein[GFP in default.]\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"protein[RFP in default.]\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] in default.]\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] in default.]\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"ordered_polymer[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]+protein[RNAP] <--> ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * ordered_polymer_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> ordered_polymer[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=ktx).\\n\",\"2protein[tetr]+ordered_polymer[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] <--> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * protein_tetr^2 * ordered_polymer_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]+protein[RNAP] <--> ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ku).\\n\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ktx).\\n\",\"dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]\\n Kf=k_forward * dna_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]] --> dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=ktx).\\n\",\"2protein[tetr]+dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]] <--> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]\\n Kf=k_forward * protein_tetr^2 * dna_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ku).\\n\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]] --> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ktx).\\n\",\"dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * dna_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_Ribo\\n Kr=k_reverse * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=translation_mm, partid=UTR1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ku).\\n\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]] --> rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[GFP]+protein[Ribo]\\n Kf=k_forward * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_GFP_forward_part_t16_forward_\\n  k_forward=0.2\\n  found_key=(mech=None, partid=None, name=ktl).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ktl).\\n\",\"rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_Ribo\\n Kr=k_reverse * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=translation_mm, partid=UTR1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ku).\\n\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]] --> rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RFP]+protein[Ribo]\\n Kf=k_forward * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_RFP_forward_part_t16_forward_\\n  k_forward=0.2\\n  found_key=(mech=None, partid=None, name=ktl).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ktl).\\n\",\"rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]]\\n Kf=k_forward * rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAase\\n Kr=k_reverse * complex_protein_RNAase_rna_part_UTR1_forward_part_RFP_forward_part_t16_forward__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=ku).\\n\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]] --> protein[RNAase]\\n Kf=k_forward * complex_protein_RNAase_rna_part_UTR1_forward_part_RFP_forward_part_t16_forward__\\n  k_forward=2\\n  found_key=(mech=None, partid=None, name=kdeg).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=kdeg).\\n\",\"rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]]\\n Kf=k_forward * rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAase\\n Kr=k_reverse * complex_protein_RNAase_rna_part_UTR1_forward_part_GFP_forward_part_t16_forward__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=ku).\\n\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]] --> protein[RNAase]\\n Kf=k_forward * complex_protein_RNAase_rna_part_UTR1_forward_part_GFP_forward_part_t16_forward__\\n  k_forward=2\\n  found_key=(mech=None, partid=None, name=kdeg).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kdeg).\\n\"]],[\"type\",[\"nothing\",\"dna\",\"protein\",\"protein\",\"protein\",\"ordered_polymer\",\"rna\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"rna\",\"protein\",\"ordered_polymer\",\"protein\",\"ordered_polymer\",\"protein\",\"complex\",\"complex\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f57bc0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f68ad0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f69790>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f6a030>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f6aea0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f6b650>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f6bb30>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f80890>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f80530>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f80cb0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f80f20>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f80c20>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f81640>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f81340>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f81e20>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f81d00>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f82090>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f82ab0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f827b0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f83200>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f83050>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f83800>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f837a0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f83e00>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f83d10>\",\"<biocrnpyler.core.propensities.MassAction object at 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50065,17.31273468221196]],[25,[53.668919178542616,-18.456201111228285]],[26,[111.45377956795822,-31.83869740659001]],[27,[-10.951724709229149,59.50239716231844]],[28,[-18.886892153408663,104.29214879699109]],[29,[-6.653190733088017,14.610065736732029]],[30,[54.402061085136346,-0.5912112964241286]],[31,[97.92088937607214,-21.047882914798365]],[32,[14.64941236594773,44.38797707148937]],[33,[29.5494259066864,76.65129762552743]],[34,[0.287869203163193,2.724553167021304]],[35,[25.256031398169693,-19.32282152272986]],[36,[42.14360627169565,-44.302417796722224]],[37,[-8.900515485082375,30.778865645635932]],[38,[-52.606444841353884,46.74192207199988]],[39,[-129.23019039701614,-137.0074392339298]],[40,[-105.42410163718077,-135.46071663550094]],[41,[-147.84218000320544,-158.12663688124235]],[42,[-144.9160744795935,-181.84749248229215]],[43,[-168.89204933765816,-140.1550650267072]],[44,[-185.9412759704713,-137.88076529095846]],[45,[-151.2007080421899,-121.7640653174971]],[46,[-152.27556966521564,-103.48804464888784]]]}}},\"node_renderer\":{\"type\":\"object\",\"name\":\"GlyphRenderer\",\"id\":\"p1108\",\"attributes\":{\"data_source\":{\"type\":\"object\",\"name\":\"ColumnDataSource\",\"id\":\"p1105\",\"attributes\":{\"selected\":{\"type\":\"object\",\"name\":\"Selection\",\"id\":\"p1106\",\"attributes\":{\"indices\":[],\"line_indices\":[]}},\"selection_policy\":{\"type\":\"object\",\"name\":\"UnionRenderers\",\"id\":\"p1107\"},\"data\":{\"type\":\"map\",\"entries\":[[\"color\",[\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\",\"cornflowerblue\"]],[\"species\",[\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"ordered_polymer[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]+protein[RNAP] <--> ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * ordered_polymer_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> ordered_polymer[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=ktx).\\n\",\"2protein[tetr]+ordered_polymer[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] <--> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * protein_tetr^2 * ordered_polymer_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]+protein[RNAP] <--> ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ku).\\n\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ktx).\\n\",\"dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]\\n Kf=k_forward * dna_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]] --> dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=ptet_leak, name=ktx).\\n\",\"2protein[tetr]+dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]] <--> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]\\n Kf=k_forward * protein_tetr^2 * dna_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_\\n Kr=k_reverse * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=ptet_tetr, name=ku).\\n\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]\\n Kf=k_forward * ordered_polymer_complex_part_ptet_protein_tetr_2x_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ku).\\n\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]] --> ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_complex_complex_part_ptet_protein_tetr_2x__protein_RNAP_forward__part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=ptet_tetr, name=ktx).\\n\",\"dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+protein[RNAP] <--> ordered_polymer[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]]\\n Kf=k_forward * dna_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_pconst_reverse_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse]] --> dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse]]+rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_ptet_forward_part_UTR1_forward_part_GFP_forward_part_t16_forward_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_pconst_protein_RNAP_reverse__\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_Ribo\\n Kr=k_reverse * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=translation_mm, partid=UTR1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ku).\\n\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]] --> rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[GFP]+protein[Ribo]\\n Kf=k_forward * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_GFP_forward_part_t16_forward_\\n  k_forward=0.2\\n  found_key=(mech=None, partid=None, name=ktl).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ktl).\\n\",\"rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_Ribo\\n Kr=k_reverse * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=translation_mm, partid=UTR1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ku).\\n\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]] --> rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RFP]+protein[Ribo]\\n Kf=k_forward * ordered_polymer_complex_part_UTR1_protein_Ribo_forward__part_RFP_forward_part_t16_forward_\\n  k_forward=0.2\\n  found_key=(mech=None, partid=None, name=ktl).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ktl).\\n\",\"rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]]\\n Kf=k_forward * rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAase\\n Kr=k_reverse * complex_protein_RNAase_rna_part_UTR1_forward_part_RFP_forward_part_t16_forward__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=ku).\\n\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]] --> protein[RNAase]\\n Kf=k_forward * complex_protein_RNAase_rna_part_UTR1_forward_part_RFP_forward_part_t16_forward__\\n  k_forward=2\\n  found_key=(mech=None, partid=None, name=kdeg).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=kdeg).\\n\",\"rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]]\\n Kf=k_forward * rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAase\\n Kr=k_reverse * complex_protein_RNAase_rna_part_UTR1_forward_part_GFP_forward_part_t16_forward__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=ku).\\n\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]] --> protein[RNAase]\\n Kf=k_forward * complex_protein_RNAase_rna_part_UTR1_forward_part_GFP_forward_part_t16_forward__\\n  k_forward=2\\n  found_key=(mech=None, partid=None, name=kdeg).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kdeg).\\n\"]],[\"type\",[\"<biocrnpyler.core.propensities.MassAction object at 0x143f57bc0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f68ad0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f69790>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f6a030>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f6aea0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f6b650>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f6bb30>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f80890>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f80530>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f80cb0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f80f20>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f80c20>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f81640>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f81340>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f81e20>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f81d00>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f82090>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f82ab0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f827b0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f83200>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f83050>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f83800>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f837a0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f83e00>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f83d10>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143fb43b0>\"]],[\"k_r\",[\"10\",\"None\",\"10\",\"None\",\"10\",\"None\",\"10\",\"None\",\"10\",\"10\",\"None\",\"10\",\"None\",\"10\",\"10\",\"None\",\"10\",\"None\",\"10\",\"None\",\"10\",\"None\",\"10\",\"None\",\"10\",\"None\"]],[\"k\",[\"100\",\"0.05\",\"100\",\"0.05\",\"100\",\"0.05\",\"100\",\"0.05\",\"100\",\"100\",\"0.05\",\"100\",\"0.05\",\"100\",\"100\",\"0.05\",\"100\",\"0.05\",\"100\",\"0.2\",\"100\",\"0.2\",\"100\",\"2\",\"100\",\"2\"]],[\"index\",[21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46]]]}}},\"view\":{\"type\":\"object\",\"name\":\"CDSView\",\"id\":\"p1109\",\"attributes\":{\"filter\":{\"type\":\"object\",\"name\":\"AllIndices\",\"id\":\"p1110\"}}},\"glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1163\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":8},\"fill_color\":{\"type\":\"field\",\"field\":\"color\"},\"marker\":{\"type\":\"value\",\"value\":\"square\"}}},\"selection_glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1164\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":8},\"fill_color\":{\"type\":\"value\",\"value\":\"#fdae61\"},\"marker\":{\"type\":\"value\",\"value\":\"square\"}}},\"hover_glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1165\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":8},\"fill_color\":{\"type\":\"value\",\"value\":\"#abdda4\"},\"marker\":{\"type\":\"value\",\"value\":\"square\"}}}}},\"edge_renderer\":{\"type\":\"object\",\"name\":\"GlyphRenderer\",\"id\":\"p1115\",\"attributes\":{\"data_source\":{\"type\":\"object\",\"name\":\"ColumnDataSource\",\"id\":\"p1112\",\"attributes\":{\"selected\":{\"type\":\"object\",\"name\":\"Selection\",\"id\":\"p1113\",\"attributes\":{\"indices\":[],\"line_indices\":[]}},\"selection_policy\":{\"type\":\"object\",\"name\":\"UnionRenderers\",\"id\":\"p1114\"},\"data\":{\"type\":\"map\",\"entries\":[[\"start\",[]],[\"end\",[]]]}}},\"view\":{\"type\":\"object\",\"name\":\"CDSView\",\"id\":\"p1116\",\"attributes\":{\"filter\":{\"type\":\"object\",\"name\":\"AllIndices\",\"id\":\"p1117\"}}},\"glyph\":{\"type\":\"object\",\"name\":\"MultiLine\",\"id\":\"p1111\"}}},\"selection_policy\":{\"type\":\"object\",\"name\":\"NodesOnly\",\"id\":\"p1118\"},\"inspection_policy\":{\"type\":\"object\",\"name\":\"NodesOnly\",\"id\":\"p1119\"}}},{\"type\":\"object\",\"name\":\"GraphRenderer\",\"id\":\"p1121\",\"attributes\":{\"layout_provider\":{\"type\":\"object\",\"name\":\"StaticLayoutProvider\",\"id\":\"p1138\",\"attributes\":{\"graph_layout\":{\"type\":\"map\",\"entries\":[[0,[118.1579042707256,-305.4383663255398]],[1,[1.2613990928910401,28.860245791699636]],[2,[20.712101085990245,23.2955214818973]],[3,[-136.24155637839425,-147.8852990659669]],[4,[-161.7997471549064,-128.7848642276056]],[5,[19.21445890895687,64.35676359439644]],[6,[-160.83091301287942,-152.19073550321025]],[7,[-7.034474374608267,88.27830326532995]],[8,[12.154623650812317,-12.041480735176503]],[9,[34.955366385104114,6.327769964942095]],[10,[40.5572465751592,-29.448172903576566]],[11,[81.54957440603633,-19.117366585931826]],[12,[-25.382178998275478,38.40950443656596]],[13,[-139.70590002424643,-127.29689394262859]],[14,[-7.4501494318031956,5.864187643733833]],[15,[-116.20719124020435,-136.02006555734334]],[16,[-147.07288727716545,300.4551247492197]],[17,[-146.251434051631,-171.05553838185867]],[18,[-315.71505977408975,-108.38895886150678]],[19,[-179.12864888558227,-139.0505962549047]],[20,[-151.9511319134557,-110.71150538293774]],[21,[8.420633291243819,67.936183086093]],[22,[-3.527108594862736,112.25048488878268]],[23,[20.800353427195887,-0.5750062284740888]],[24,[56.131157923250065,17.31273468221196]],[25,[53.668919178542616,-18.456201111228285]],[26,[111.45377956795822,-31.83869740659001]],[27,[-10.951724709229149,59.50239716231844]],[28,[-18.886892153408663,104.29214879699109]],[29,[-6.653190733088017,14.610065736732029]],[30,[54.402061085136346,-0.5912112964241286]],[31,[97.92088937607214,-21.047882914798365]],[32,[14.64941236594773,44.38797707148937]],[33,[29.5494259066864,76.65129762552743]],[34,[0.287869203163193,2.724553167021304]],[35,[25.256031398169693,-19.32282152272986]],[36,[42.14360627169565,-44.302417796722224]],[37,[-8.900515485082375,30.778865645635932]],[38,[-52.606444841353884,46.74192207199988]],[39,[-129.23019039701614,-137.0074392339298]],[40,[-105.42410163718077,-135.46071663550094]],[41,[-147.84218000320544,-158.12663688124235]],[42,[-144.9160744795935,-181.84749248229215]],[43,[-168.89204933765816,-140.1550650267072]],[44,[-185.9412759704713,-137.88076529095846]],[45,[-151.2007080421899,-121.7640653174971]],[46,[-152.27556966521564,-103.48804464888784]]]}}},\"node_renderer\":{\"type\":\"object\",\"name\":\"GlyphRenderer\",\"id\":\"p1126\",\"attributes\":{\"data_source\":{\"type\":\"object\",\"name\":\"ColumnDataSource\",\"id\":\"p1123\",\"attributes\":{\"selected\":{\"type\":\"object\",\"name\":\"Selection\",\"id\":\"p1124\",\"attributes\":{\"indices\":[],\"line_indices\":[]}},\"selection_policy\":{\"type\":\"object\",\"name\":\"UnionRenderers\",\"id\":\"p1125\"},\"data\":{\"type\":\"map\",\"entries\":[[\"species\",[\"nothing\",\"dna[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse] in default.]\",\"protein[RNAP in default.]\",\"protein[Ribo in default.]\",\"protein[RNAase in default.]\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse] in default.]\",\"rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[complex[part[ptet]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse] in default.]\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse] in default.]\",\"ordered_polymer[complex[part[ptet]:2x_protein[tetr]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse] in default.]\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[pconst-reverse] in default.]\",\"ordered_polymer[complex[complex[part[ptet]:2x_protein[tetr]]:protein[RNAP]-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse] in default.]\",\"ordered_polymer[part[ptet-forward]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]:part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[pconst]:protein[RNAP]-reverse] in default.]\",\"rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"protein[tetr in default.]\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"protein[GFP in default.]\",\"ordered_polymer[complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"protein[RFP in default.]\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] in default.]\",\"complex[protein[RNAase]:rna[part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] in default.]\"]],[\"type\",[\"nothing\",\"dna\",\"protein\",\"protein\",\"protein\",\"ordered_polymer\",\"rna\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"rna\",\"protein\",\"ordered_polymer\",\"protein\",\"ordered_polymer\",\"protein\",\"complex\",\"complex\"]],[\"image\",[\"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\",null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null]],[\"color\",[\"purple\",\"white\",\"green\",\"green\",\"green\",\"grey\",\"orange\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"orange\",\"green\",\"grey\",\"lightgreen\",\"grey\",\"red\",\"cyan\",\"cyan\"]],[\"index\",[0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20]]]}}},\"view\":{\"type\":\"object\",\"name\":\"CDSView\",\"id\":\"p1127\",\"attributes\":{\"filter\":{\"type\":\"object\",\"name\":\"AllIndices\",\"id\":\"p1128\"}}},\"glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1166\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":12},\"fill_color\":{\"type\":\"field\",\"field\":\"color\"}}},\"selection_glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1167\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":15},\"fill_color\":{\"type\":\"value\",\"value\":\"#fdae61\"}}},\"hover_glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1168\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":15},\"fill_color\":{\"type\":\"value\",\"value\":\"#abdda4\"}}}}},\"edge_renderer\":{\"type\":\"object\",\"name\":\"GlyphRenderer\",\"id\":\"p1133\",\"attributes\":{\"data_source\":{\"type\":\"object\",\"name\":\"ColumnDataSource\",\"id\":\"p1130\",\"attributes\":{\"selected\":{\"type\":\"object\",\"name\":\"Selection\",\"id\":\"p1131\",\"attributes\":{\"indices\":[],\"line_indices\":[]}},\"selection_policy\":{\"type\":\"object\",\"name\":\"UnionRenderers\",\"id\":\"p1132\"},\"data\":{\"type\":\"map\",\"entries\":[[\"start\",[]],[\"end\",[]]]}}},\"view\":{\"type\":\"object\",\"name\":\"CDSView\",\"id\":\"p1134\",\"attributes\":{\"filter\":{\"type\":\"object\",\"name\":\"AllIndices\",\"id\":\"p1135\"}}},\"glyph\":{\"type\":\"object\",\"name\":\"MultiLine\",\"id\":\"p1129\"}}},\"selection_policy\":{\"type\":\"object\",\"name\":\"NodesOnly\",\"id\":\"p1136\"},\"inspection_policy\":{\"type\":\"object\",\"name\":\"NodesOnly\",\"id\":\"p1137\"}}}],\"toolbar\":{\"type\":\"object\",\"name\":\"Toolbar\",\"id\":\"p1102\",\"attributes\":{\"tools\":[{\"type\":\"object\",\"name\":\"HoverTool\",\"id\":\"p1169\",\"attributes\":{\"renderers\":[{\"id\":\"p1139\"}],\"tooltips\":null}},{\"type\":\"object\",\"name\":\"HoverTool\",\"id\":\"p1170\",\"attributes\":{\"renderers\":[{\"id\":\"p1121\"}],\"tooltips\":[[\"name\",\"@species\"],[\"type\",\"@type\"]],\"attachment\":\"right\"}},{\"type\":\"object\",\"name\":\"HoverTool\",\"id\":\"p1171\",\"attributes\":{\"renderers\":[{\"id\":\"p1103\"}],\"tooltips\":[[\"reaction\",\"@species\"],[\"type\",\"@type\"],[\"k_f\",\"@k\"],[\"k_r\",\"@k_r\"]],\"attachment\":\"right\"}},{\"type\":\"object\",\"name\":\"TapTool\",\"id\":\"p1172\",\"attributes\":{\"renderers\":\"auto\"}},{\"type\":\"object\",\"name\":\"BoxSelectTool\",\"id\":\"p1173\",\"attributes\":{\"renderers\":\"auto\",\"overlay\":{\"type\":\"object\",\"name\":\"BoxAnnotation\",\"id\":\"p1174\",\"attributes\":{\"syncable\":false,\"line_color\":\"black\",\"line_alpha\":1.0,\"line_width\":2,\"line_dash\":[4,4],\"fill_color\":\"lightgrey\",\"fill_alpha\":0.5,\"level\":\"overlay\",\"visible\":false,\"left\":{\"type\":\"number\",\"value\":\"nan\"},\"right\":{\"type\":\"number\",\"value\":\"nan\"},\"top\":{\"type\":\"number\",\"value\":\"nan\"},\"bottom\":{\"type\":\"number\",\"value\":\"nan\"},\"editable\":true,\"handles\":{\"type\":\"object\",\"name\":\"BoxInteractionHandles\",\"id\":\"p1180\",\"attributes\":{\"all\":{\"type\":\"object\",\"name\":\"AreaVisuals\",\"id\":\"p1179\",\"attributes\":{\"fill_color\":\"white\",\"hover_fill_color\":\"lightgray\"}}}}}}}},{\"type\":\"object\",\"name\":\"PanTool\",\"id\":\"p1181\"},{\"type\":\"object\",\"name\":\"WheelZoomTool\",\"id\":\"p1182\",\"attributes\":{\"renderers\":\"auto\"}}]}}}}]}};\n",
       "  const render_items = [{\"docid\":\"6ce0a509-75ae-4916-a1da-5977a49c7247\",\"roots\":{\"p1096\":\"c6410d77-f18a-4baf-b50e-b17e0d29f1cd\"},\"root_ids\":[\"p1096\"]}];\n",
       "  void root.Bokeh.embed.embed_items_notebook(docs_json, render_items);\n",
       "  }\n",
       "  if (root.Bokeh !== undefined) {\n",
       "    embed_document(root);\n",
       "  } else {\n",
       "    let attempts = 0;\n",
       "    const timer = setInterval(function(root) {\n",
       "      if (root.Bokeh !== undefined) {\n",
       "        clearInterval(timer);\n",
       "        embed_document(root);\n",
       "      } else {\n",
       "        attempts++;\n",
       "        if (attempts > 100) {\n",
       "          clearInterval(timer);\n",
       "          console.log(\"Bokeh: ERROR: Unable to run BokehJS code because BokehJS library is missing\");\n",
       "        }\n",
       "      }\n",
       "    }, 10, root)\n",
       "  }\n",
       "})(window);"
      ],
      "application/vnd.bokehjs_exec.v0+json": ""
     },
     "metadata": {
      "application/vnd.bokehjs_exec.v0+json": {
       "id": "p1096"
      }
     },
     "output_type": "display_data"
    }
   ],
   "source": [
    "plotNetwork(myCRN)\n"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Now you can see that many more arrows lead to each RNA. But there is still only one promoter per RNA, how can it be? Well, now that both promoters and transcripts are on the same DNA, we must take into account the fact that you can have both promoters with RNA polymerase bound, so for example Promoter1 can lead to RNA1 whether or not Promoter2 is bound by RNAP.\n",
    "\n",
    "We can even make a more complicated DNA construct, such as what happens before and after a promoter is \"flipped\" by integrase activity"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "metadata": {
    "tags": []
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "done\n"
     ]
    }
   ],
   "source": [
    "from biocrnpyler.components import IntegraseSite, IntegraseRule, Integrase_Enumerator\n",
    "attB = IntegraseSite(\"attB\",\"attB\",integrase=\"Bxb1\")\n",
    "attP = IntegraseSite(\"attP\",\"attP\",integrase=\"Bxb1\")\n",
    "\n",
    "diffatt = IntegraseSite(\"attL\",\"attL\",integrase=\"phic31\")\n",
    "\n",
    "construct_1 = DNA_construct([[t16,\"reverse\"],[rfp,\"reverse\"],[utr1,\"reverse\"],[attP,\"forward\"],[pconst,\"forward\"],[attB,\"reverse\"],[utr1,\"forward\"],[gfp,\"forward\"],[t16,\"forward\"]])\n",
    "\n",
    "components = [construct_1]\n",
    "bxb1 = Integrase_Enumerator(\"Bxb1\", int_mechanisms={\"Bxb1\":IntegraseRule(\"Bxb1\")})\n",
    "\n",
    "myMixture = TxTlExtract(name = \"txtl\", parameters = parameters, components = components,global_component_enumerators=[bxb1])\n",
    "\n",
    "\n",
    "#now, we are using dnaplotlib to plot the constructs\n",
    "enumerated_constructs = myMixture.global_component_enumeration(recursion_depth=4)\n",
    "myCRN = myMixture.compile_crn()\n",
    "if(dpl_enabled):\n",
    "    conlist = []\n",
    "    for con in enumerated_constructs:\n",
    "        if(isinstance(con,DNA_construct)):\n",
    "            conlist += [con]\n",
    "    render_constructs(conlist)\n",
    "#some very basic parameters are defined\n",
    "parameters={\"cooperativity\":2,\"kb\":100, \"ku\":10, \"ktx\":.05, \"ktl\":.2, \"kdeg\":2,\"kint\":.05}\n",
    "\n",
    "\n",
    "print(\"done\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "And we can see that this construct 'knows' that a forward facing promoter will not produce RNAs that face the reverse direction."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 7,
   "metadata": {
    "tags": []
   },
   "outputs": [
    {
     "data": {
      "text/html": [
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       "    <div>\n",
       "        <a href=\"https://bokeh.org\" target=\"_blank\" class=\"bk-notebook-logo\"></a>\n",
       "        <span id=\"f5332154-a102-4480-960f-6935cb99c14f\">Loading BokehJS ...</span>\n",
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      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "'use strict';\n",
       "(function(root) {\n",
       "  function now() {\n",
       "    return new Date();\n",
       "  }\n",
       "\n",
       "  const force = true;\n",
       "\n",
       "  if (typeof root._bokeh_onload_callbacks === \"undefined\" || force === true) {\n",
       "    root._bokeh_onload_callbacks = [];\n",
       "    root._bokeh_is_loading = undefined;\n",
       "  }\n",
       "\n",
       "const JS_MIME_TYPE = 'application/javascript';\n",
       "  const HTML_MIME_TYPE = 'text/html';\n",
       "  const EXEC_MIME_TYPE = 'application/vnd.bokehjs_exec.v0+json';\n",
       "  const CLASS_NAME = 'output_bokeh rendered_html';\n",
       "\n",
       "  /**\n",
       "   * Render data to the DOM node\n",
       "   */\n",
       "  function render(props, node) {\n",
       "    const script = document.createElement(\"script\");\n",
       "    node.appendChild(script);\n",
       "  }\n",
       "\n",
       "  /**\n",
       "   * Handle when an output is cleared or removed\n",
       "   */\n",
       "  function handleClearOutput(event, handle) {\n",
       "    function drop(id) {\n",
       "      const view = Bokeh.index.get_by_id(id)\n",
       "      if (view != null) {\n",
       "        view.model.document.clear()\n",
       "        Bokeh.index.delete(view)\n",
       "      }\n",
       "    }\n",
       "\n",
       "    const cell = handle.cell;\n",
       "\n",
       "    const id = cell.output_area._bokeh_element_id;\n",
       "    const server_id = cell.output_area._bokeh_server_id;\n",
       "\n",
       "    // Clean up Bokeh references\n",
       "    if (id != null) {\n",
       "      drop(id)\n",
       "    }\n",
       "\n",
       "    if (server_id !== undefined) {\n",
       "      // Clean up Bokeh references\n",
       "      const cmd_clean = \"from bokeh.io.state import curstate; print(curstate().uuid_to_server['\" + server_id + \"'].get_sessions()[0].document.roots[0]._id)\";\n",
       "      cell.notebook.kernel.execute(cmd_clean, {\n",
       "        iopub: {\n",
       "          output: function(msg) {\n",
       "            const id = msg.content.text.trim()\n",
       "            drop(id)\n",
       "          }\n",
       "        }\n",
       "      });\n",
       "      // Destroy server and session\n",
       "      const cmd_destroy = \"import bokeh.io.notebook as ion; ion.destroy_server('\" + server_id + \"')\";\n",
       "      cell.notebook.kernel.execute(cmd_destroy);\n",
       "    }\n",
       "  }\n",
       "\n",
       "  /**\n",
       "   * Handle when a new output is added\n",
       "   */\n",
       "  function handleAddOutput(event, handle) {\n",
       "    const output_area = handle.output_area;\n",
       "    const output = handle.output;\n",
       "\n",
       "    // limit handleAddOutput to display_data with EXEC_MIME_TYPE content only\n",
       "    if ((output.output_type != \"display_data\") || (!Object.prototype.hasOwnProperty.call(output.data, EXEC_MIME_TYPE))) {\n",
       "      return\n",
       "    }\n",
       "\n",
       "    const toinsert = output_area.element.find(\".\" + CLASS_NAME.split(' ')[0]);\n",
       "\n",
       "    if (output.metadata[EXEC_MIME_TYPE][\"id\"] !== undefined) {\n",
       "      toinsert[toinsert.length - 1].firstChild.textContent = output.data[JS_MIME_TYPE];\n",
       "      // store reference to embed id on output_area\n",
       "      output_area._bokeh_element_id = output.metadata[EXEC_MIME_TYPE][\"id\"];\n",
       "    }\n",
       "    if (output.metadata[EXEC_MIME_TYPE][\"server_id\"] !== undefined) {\n",
       "      const bk_div = document.createElement(\"div\");\n",
       "      bk_div.innerHTML = output.data[HTML_MIME_TYPE];\n",
       "      const script_attrs = bk_div.children[0].attributes;\n",
       "      for (let i = 0; i < script_attrs.length; i++) {\n",
       "        toinsert[toinsert.length - 1].firstChild.setAttribute(script_attrs[i].name, script_attrs[i].value);\n",
       "        toinsert[toinsert.length - 1].firstChild.textContent = bk_div.children[0].textContent\n",
       "      }\n",
       "      // store reference to server id on output_area\n",
       "      output_area._bokeh_server_id = output.metadata[EXEC_MIME_TYPE][\"server_id\"];\n",
       "    }\n",
       "  }\n",
       "\n",
       "  function register_renderer(events, OutputArea) {\n",
       "\n",
       "    function append_mime(data, metadata, element) {\n",
       "      // create a DOM node to render to\n",
       "      const toinsert = this.create_output_subarea(\n",
       "        metadata,\n",
       "        CLASS_NAME,\n",
       "        EXEC_MIME_TYPE\n",
       "      );\n",
       "      this.keyboard_manager.register_events(toinsert);\n",
       "      // Render to node\n",
       "      const props = {data: data, metadata: metadata[EXEC_MIME_TYPE]};\n",
       "      render(props, toinsert[toinsert.length - 1]);\n",
       "      element.append(toinsert);\n",
       "      return toinsert\n",
       "    }\n",
       "\n",
       "    /* Handle when an output is cleared or removed */\n",
       "    events.on('clear_output.CodeCell', handleClearOutput);\n",
       "    events.on('delete.Cell', handleClearOutput);\n",
       "\n",
       "    /* Handle when a new output is added */\n",
       "    events.on('output_added.OutputArea', handleAddOutput);\n",
       "\n",
       "    /**\n",
       "     * Register the mime type and append_mime function with output_area\n",
       "     */\n",
       "    OutputArea.prototype.register_mime_type(EXEC_MIME_TYPE, append_mime, {\n",
       "      /* Is output safe? */\n",
       "      safe: true,\n",
       "      /* Index of renderer in `output_area.display_order` */\n",
       "      index: 0\n",
       "    });\n",
       "  }\n",
       "\n",
       "  // register the mime type if in Jupyter Notebook environment and previously unregistered\n",
       "  if (root.Jupyter !== undefined) {\n",
       "    const events = require('base/js/events');\n",
       "    const OutputArea = require('notebook/js/outputarea').OutputArea;\n",
       "\n",
       "    if (OutputArea.prototype.mime_types().indexOf(EXEC_MIME_TYPE) == -1) {\n",
       "      register_renderer(events, OutputArea);\n",
       "    }\n",
       "  }\n",
       "  if (typeof (root._bokeh_timeout) === \"undefined\" || force === true) {\n",
       "    root._bokeh_timeout = Date.now() + 5000;\n",
       "    root._bokeh_failed_load = false;\n",
       "  }\n",
       "\n",
       "  const NB_LOAD_WARNING = {'data': {'text/html':\n",
       "     \"<div style='background-color: #fdd'>\\n\"+\n",
       "     \"<p>\\n\"+\n",
       "     \"BokehJS does not appear to have successfully loaded. If loading BokehJS from CDN, this \\n\"+\n",
       "     \"may be due to a slow or bad network connection. Possible fixes:\\n\"+\n",
       "     \"</p>\\n\"+\n",
       "     \"<ul>\\n\"+\n",
       "     \"<li>re-rerun `output_notebook()` to attempt to load from CDN again, or</li>\\n\"+\n",
       "     \"<li>use INLINE resources instead, as so:</li>\\n\"+\n",
       "     \"</ul>\\n\"+\n",
       "     \"<code>\\n\"+\n",
       "     \"from bokeh.resources import INLINE\\n\"+\n",
       "     \"output_notebook(resources=INLINE)\\n\"+\n",
       "     \"</code>\\n\"+\n",
       "     \"</div>\"}};\n",
       "\n",
       "  function display_loaded(error = null) {\n",
       "    const el = document.getElementById(\"f5332154-a102-4480-960f-6935cb99c14f\");\n",
       "    if (el != null) {\n",
       "      const html = (() => {\n",
       "        if (typeof root.Bokeh === \"undefined\") {\n",
       "          if (error == null) {\n",
       "            return \"BokehJS is loading ...\";\n",
       "          } else {\n",
       "            return \"BokehJS failed to load.\";\n",
       "          }\n",
       "        } else {\n",
       "          const prefix = `BokehJS ${root.Bokeh.version}`;\n",
       "          if (error == null) {\n",
       "            return `${prefix} successfully loaded.`;\n",
       "          } else {\n",
       "            return `${prefix} <b>encountered errors</b> while loading and may not function as expected.`;\n",
       "          }\n",
       "        }\n",
       "      })();\n",
       "      el.innerHTML = html;\n",
       "\n",
       "      if (error != null) {\n",
       "        const wrapper = document.createElement(\"div\");\n",
       "        wrapper.style.overflow = \"auto\";\n",
       "        wrapper.style.height = \"5em\";\n",
       "        wrapper.style.resize = \"vertical\";\n",
       "        const content = document.createElement(\"div\");\n",
       "        content.style.fontFamily = \"monospace\";\n",
       "        content.style.whiteSpace = \"pre-wrap\";\n",
       "        content.style.backgroundColor = \"rgb(255, 221, 221)\";\n",
       "        content.textContent = error.stack ?? error.toString();\n",
       "        wrapper.append(content);\n",
       "        el.append(wrapper);\n",
       "      }\n",
       "    } else if (Date.now() < root._bokeh_timeout) {\n",
       "      setTimeout(() => display_loaded(error), 100);\n",
       "    }\n",
       "  }\n",
       "\n",
       "  function run_callbacks() {\n",
       "    try {\n",
       "      root._bokeh_onload_callbacks.forEach(function(callback) {\n",
       "        if (callback != null)\n",
       "          callback();\n",
       "      });\n",
       "    } finally {\n",
       "      delete root._bokeh_onload_callbacks\n",
       "    }\n",
       "    console.debug(\"Bokeh: all callbacks have finished\");\n",
       "  }\n",
       "\n",
       "  function load_libs(css_urls, js_urls, callback) {\n",
       "    if (css_urls == null) css_urls = [];\n",
       "    if (js_urls == null) js_urls = [];\n",
       "\n",
       "    root._bokeh_onload_callbacks.push(callback);\n",
       "    if (root._bokeh_is_loading > 0) {\n",
       "      console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n",
       "      return null;\n",
       "    }\n",
       "    if (js_urls == null || js_urls.length === 0) {\n",
       "      run_callbacks();\n",
       "      return null;\n",
       "    }\n",
       "    console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n",
       "    root._bokeh_is_loading = css_urls.length + js_urls.length;\n",
       "\n",
       "    function on_load() {\n",
       "      root._bokeh_is_loading--;\n",
       "      if (root._bokeh_is_loading === 0) {\n",
       "        console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n",
       "        run_callbacks()\n",
       "      }\n",
       "    }\n",
       "\n",
       "    function on_error(url) {\n",
       "      console.error(\"failed to load \" + url);\n",
       "    }\n",
       "\n",
       "    for (let i = 0; i < css_urls.length; i++) {\n",
       "      const url = css_urls[i];\n",
       "      const element = document.createElement(\"link\");\n",
       "      element.onload = on_load;\n",
       "      element.onerror = on_error.bind(null, url);\n",
       "      element.rel = \"stylesheet\";\n",
       "      element.type = \"text/css\";\n",
       "      element.href = url;\n",
       "      console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n",
       "      document.body.appendChild(element);\n",
       "    }\n",
       "\n",
       "    for (let i = 0; i < js_urls.length; i++) {\n",
       "      const url = js_urls[i];\n",
       "      const element = document.createElement('script');\n",
       "      element.onload = on_load;\n",
       "      element.onerror = on_error.bind(null, url);\n",
       "      element.async = false;\n",
       "      element.src = url;\n",
       "      console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n",
       "      document.head.appendChild(element);\n",
       "    }\n",
       "  };\n",
       "\n",
       "  function inject_raw_css(css) {\n",
       "    const element = document.createElement(\"style\");\n",
       "    element.appendChild(document.createTextNode(css));\n",
       "    document.body.appendChild(element);\n",
       "  }\n",
       "\n",
       "  const js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-gl-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-mathjax-3.7.3.min.js\"];\n",
       "  const css_urls = [];\n",
       "\n",
       "  const inline_js = [    function(Bokeh) {\n",
       "      Bokeh.set_log_level(\"info\");\n",
       "    },\n",
       "function(Bokeh) {\n",
       "    }\n",
       "  ];\n",
       "\n",
       "  function run_inline_js() {\n",
       "    if (root.Bokeh !== undefined || force === true) {\n",
       "      try {\n",
       "            for (let i = 0; i < inline_js.length; i++) {\n",
       "      inline_js[i].call(root, root.Bokeh);\n",
       "    }\n",
       "\n",
       "      } catch (error) {display_loaded(error);throw error;\n",
       "      }if (force === true) {\n",
       "        display_loaded();\n",
       "      }} else if (Date.now() < root._bokeh_timeout) {\n",
       "      setTimeout(run_inline_js, 100);\n",
       "    } else if (!root._bokeh_failed_load) {\n",
       "      console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n",
       "      root._bokeh_failed_load = true;\n",
       "    } else if (force !== true) {\n",
       "      const cell = $(document.getElementById(\"f5332154-a102-4480-960f-6935cb99c14f\")).parents('.cell').data().cell;\n",
       "      cell.output_area.append_execute_result(NB_LOAD_WARNING)\n",
       "    }\n",
       "  }\n",
       "\n",
       "  if (root._bokeh_is_loading === 0) {\n",
       "    console.debug(\"Bokeh: BokehJS loaded, going straight to plotting\");\n",
       "    run_inline_js();\n",
       "  } else {\n",
       "    load_libs(css_urls, js_urls, function() {\n",
       "      console.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n",
       "      run_inline_js();\n",
       "    });\n",
       "  }\n",
       "}(window));"
      ],
      "application/vnd.bokehjs_load.v0+json": "'use strict';\n(function(root) {\n  function now() {\n    return new Date();\n  }\n\n  const force = true;\n\n  if (typeof root._bokeh_onload_callbacks === \"undefined\" || force === true) {\n    root._bokeh_onload_callbacks = [];\n    root._bokeh_is_loading = undefined;\n  }\n\n\n  if (typeof (root._bokeh_timeout) === \"undefined\" || force === true) {\n    root._bokeh_timeout = Date.now() + 5000;\n    root._bokeh_failed_load = false;\n  }\n\n  const NB_LOAD_WARNING = {'data': {'text/html':\n     \"<div style='background-color: #fdd'>\\n\"+\n     \"<p>\\n\"+\n     \"BokehJS does not appear to have successfully loaded. If loading BokehJS from CDN, this \\n\"+\n     \"may be due to a slow or bad network connection. Possible fixes:\\n\"+\n     \"</p>\\n\"+\n     \"<ul>\\n\"+\n     \"<li>re-rerun `output_notebook()` to attempt to load from CDN again, or</li>\\n\"+\n     \"<li>use INLINE resources instead, as so:</li>\\n\"+\n     \"</ul>\\n\"+\n     \"<code>\\n\"+\n     \"from bokeh.resources import INLINE\\n\"+\n     \"output_notebook(resources=INLINE)\\n\"+\n     \"</code>\\n\"+\n     \"</div>\"}};\n\n  function display_loaded(error = null) {\n    const el = document.getElementById(\"f5332154-a102-4480-960f-6935cb99c14f\");\n    if (el != null) {\n      const html = (() => {\n        if (typeof root.Bokeh === \"undefined\") {\n          if (error == null) {\n            return \"BokehJS is loading ...\";\n          } else {\n            return \"BokehJS failed to load.\";\n          }\n        } else {\n          const prefix = `BokehJS ${root.Bokeh.version}`;\n          if (error == null) {\n            return `${prefix} successfully loaded.`;\n          } else {\n            return `${prefix} <b>encountered errors</b> while loading and may not function as expected.`;\n          }\n        }\n      })();\n      el.innerHTML = html;\n\n      if (error != null) {\n        const wrapper = document.createElement(\"div\");\n        wrapper.style.overflow = \"auto\";\n        wrapper.style.height = \"5em\";\n        wrapper.style.resize = \"vertical\";\n        const content = document.createElement(\"div\");\n        content.style.fontFamily = \"monospace\";\n        content.style.whiteSpace = \"pre-wrap\";\n        content.style.backgroundColor = \"rgb(255, 221, 221)\";\n        content.textContent = error.stack ?? error.toString();\n        wrapper.append(content);\n        el.append(wrapper);\n      }\n    } else if (Date.now() < root._bokeh_timeout) {\n      setTimeout(() => display_loaded(error), 100);\n    }\n  }\n\n  function run_callbacks() {\n    try {\n      root._bokeh_onload_callbacks.forEach(function(callback) {\n        if (callback != null)\n          callback();\n      });\n    } finally {\n      delete root._bokeh_onload_callbacks\n    }\n    console.debug(\"Bokeh: all callbacks have finished\");\n  }\n\n  function load_libs(css_urls, js_urls, callback) {\n    if (css_urls == null) css_urls = [];\n    if (js_urls == null) js_urls = [];\n\n    root._bokeh_onload_callbacks.push(callback);\n    if (root._bokeh_is_loading > 0) {\n      console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n      return null;\n    }\n    if (js_urls == null || js_urls.length === 0) {\n      run_callbacks();\n      return null;\n    }\n    console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n    root._bokeh_is_loading = css_urls.length + js_urls.length;\n\n    function on_load() {\n      root._bokeh_is_loading--;\n      if (root._bokeh_is_loading === 0) {\n        console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n        run_callbacks()\n      }\n    }\n\n    function on_error(url) {\n      console.error(\"failed to load \" + url);\n    }\n\n    for (let i = 0; i < css_urls.length; i++) {\n      const url = css_urls[i];\n      const element = document.createElement(\"link\");\n      element.onload = on_load;\n      element.onerror = on_error.bind(null, url);\n      element.rel = \"stylesheet\";\n      element.type = \"text/css\";\n      element.href = url;\n      console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n      document.body.appendChild(element);\n    }\n\n    for (let i = 0; i < js_urls.length; i++) {\n      const url = js_urls[i];\n      const element = document.createElement('script');\n      element.onload = on_load;\n      element.onerror = on_error.bind(null, url);\n      element.async = false;\n      element.src = url;\n      console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n      document.head.appendChild(element);\n    }\n  };\n\n  function inject_raw_css(css) {\n    const element = document.createElement(\"style\");\n    element.appendChild(document.createTextNode(css));\n    document.body.appendChild(element);\n  }\n\n  const js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-gl-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-3.7.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-mathjax-3.7.3.min.js\"];\n  const css_urls = [];\n\n  const inline_js = [    function(Bokeh) {\n      Bokeh.set_log_level(\"info\");\n    },\nfunction(Bokeh) {\n    }\n  ];\n\n  function run_inline_js() {\n    if (root.Bokeh !== undefined || force === true) {\n      try {\n            for (let i = 0; i < inline_js.length; i++) {\n      inline_js[i].call(root, root.Bokeh);\n    }\n\n      } catch (error) {display_loaded(error);throw error;\n      }if (force === true) {\n        display_loaded();\n      }} else if (Date.now() < root._bokeh_timeout) {\n      setTimeout(run_inline_js, 100);\n    } else if (!root._bokeh_failed_load) {\n      console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n      root._bokeh_failed_load = true;\n    } else if (force !== true) {\n      const cell = $(document.getElementById(\"f5332154-a102-4480-960f-6935cb99c14f\")).parents('.cell').data().cell;\n      cell.output_area.append_execute_result(NB_LOAD_WARNING)\n    }\n  }\n\n  if (root._bokeh_is_loading === 0) {\n    console.debug(\"Bokeh: BokehJS loaded, going straight to plotting\");\n    run_inline_js();\n  } else {\n    load_libs(css_urls, js_urls, function() {\n      console.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n      run_inline_js();\n    });\n  }\n}(window));"
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "/Users/murray/Library/CloudStorage/Dropbox/macosx/src/biocrnpyler/biocrnpyler/utils/plotting.py:203: UserWarning: Node keys in 'layout_function' don't match node keys in the graph. These nodes may not be displayed correctly.\n",
      "  reaction_renderer = from_networkx(DGreactions, positions, center=(0, 0))\n",
      "/Users/murray/Library/CloudStorage/Dropbox/macosx/src/biocrnpyler/biocrnpyler/utils/plotting.py:204: UserWarning: Node keys in 'layout_function' don't match node keys in the graph. These nodes may not be displayed correctly.\n",
      "  species_renderer = from_networkx(DGspecies, positions, center=(0, 0))\n"
     ]
    },
    {
     "data": {
      "text/html": [
       "\n",
       "  <div id=\"fb6e6205-5de3-4af2-90d6-f42c133aa95d\" data-root-id=\"p1187\" style=\"display: contents;\"></div>\n"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "(function(root) {\n",
       "  function embed_document(root) {\n",
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default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[attB-reverse]:complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"protein[GFP in default.]\",\"ordered_polymer[part[attR-reverse]:complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"protein[RFP in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"complex[protein[RNAase]:rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] in default.]\",\"complex[protein[RNAase]:rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_^2\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_^2\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"dna[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * dna_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> dna[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[part[attB-reverse]:complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_Ribo\\n Kr=k_reverse * ordered_polymer_part_attB_reverse_complex_part_UTR1_protein_Ribo_forward__part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=translation_mm, partid=UTR1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ku).\\n\",\"ordered_polymer[part[attB-reverse]:complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]] --> rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[GFP]+protein[Ribo]\\n Kf=k_forward * ordered_polymer_part_attB_reverse_complex_part_UTR1_protein_Ribo_forward__part_GFP_forward_part_t16_forward_\\n  k_forward=0.2\\n  found_key=(mech=None, partid=None, name=ktl).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ktl).\\n\",\"rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[part[attR-reverse]:complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_Ribo\\n Kr=k_reverse * ordered_polymer_part_attR_reverse_complex_part_UTR1_protein_Ribo_forward__part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=translation_mm, partid=UTR1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ku).\\n\",\"ordered_polymer[part[attR-reverse]:complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]] --> rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RFP]+protein[Ribo]\\n Kf=k_forward * ordered_polymer_part_attR_reverse_complex_part_UTR1_protein_Ribo_forward__part_RFP_forward_part_t16_forward_\\n  k_forward=0.2\\n  found_key=(mech=None, partid=None, name=ktl).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ktl).\\n\",\"rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]]\\n Kf=k_forward * rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAase\\n Kr=k_reverse * complex_protein_RNAase_rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=ku).\\n\",\"complex[protein[RNAase]:rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]] --> protein[RNAase]\\n Kf=k_forward * complex_protein_RNAase_rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward__\\n  k_forward=2\\n  found_key=(mech=None, partid=None, name=kdeg).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kdeg).\\n\",\"rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]]\\n Kf=k_forward * rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAase\\n Kr=k_reverse * complex_protein_RNAase_rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=ku).\\n\",\"complex[protein[RNAase]:rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]] --> protein[RNAase]\\n Kf=k_forward * complex_protein_RNAase_rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward__\\n  k_forward=2\\n  found_key=(mech=None, partid=None, name=kdeg).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=kdeg).\\n\"]],[\"type\",[\"nothing\",\"dna\",\"protein\",\"protein\",\"protein\",\"dna\",\"dna\",\"dna\",\"ordered_polymer\",\"rna\",\"ordered_polymer\",\"protein\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"rna\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"protein\",\"ordered_polymer\",\"protein\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"complex\",\"complex\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443ccfb0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443cd3a0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443cd580>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443ce8a0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443cf6e0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443ce510>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443cfce0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e1820>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e09b0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e1640>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e2a20>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e2e70>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e3560>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e3a40>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e3c50>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f1580>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f21e0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f1a90>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f1be0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f2750>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f3a70>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f36b0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f3860>\",\"<biocrnpyler.core.propensities.MassAction object at 0x144429160>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14442a0c0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14442a810>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14442b2c0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14442b590>\",\"<biocrnpyler.core.propensities.MassAction object at 0x144468410>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14442acc0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x144469460>\",\"<biocrnpyler.core.propensities.MassAction object at 0x144469d00>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14446a2d0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14446aba0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14446b1a0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14446bd70>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14446a8d0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14446bf20>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444a1880>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444a2330>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444a2ea0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444a30b0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444a2600>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444a3c50>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444d98e0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444d9f10>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444daa80>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444dac90>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444daed0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14451c3e0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444d9340>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14451d4f0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14451dd30>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14451e690>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14451f200>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14451f410>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14455c3b0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14451e960>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14455cd10>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14455c290>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14455d7c0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14455d460>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14455eae0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14455f5f0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14455faa0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14455fec0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x144595730>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1445950a0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1445951f0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x144596e10>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1445976b0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1445979b0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x144597c80>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1445d1460>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f821b0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x143f82ae0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1445d31a0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1445d2360>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1445d3d10>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1445d3920>\",\"<biocrnpyler.core.propensities.MassAction object at 0x145011940>\",\"<biocrnpyler.core.propensities.MassAction object at 0x145011ee0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x145012d80>\",\"<biocrnpyler.core.propensities.MassAction object at 0x145013890>\",\"<biocrnpyler.core.propensities.MassAction object at 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<--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_^2\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_^2\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_part_attP_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attP-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attP_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_complex_part_attL_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"dna[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * dna_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> dna[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_forward__complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attP]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attP_protein_Bxb1_2x_forward__part_pconst_forward_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_GFP_reverse_part_UTR1_reverse_part_attL_forward_part_pconst_forward_complex_part_attB_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attP_protein_Bxb1_2x_reverse__part_UTR1_forward_part_RFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=kint).\\n  search_key=(mech=Bxb1, partid=Bxb1, name=kint).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__complex_part_pconst_protein_RNAP_reverse__complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_complex_part_attR_protein_Bxb1_2x_forward__part_pconst_reverse_part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAP] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAP\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=transcription_mm, partid=pconst, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ku).\\n\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] --> dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAP]\\n Kf=k_forward * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_complex_part_pconst_protein_RNAP_reverse__part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=0.05\\n  found_key=(mech=None, partid=None, name=ktx).\\n  search_key=(mech=transcription_mm, partid=pconst, name=ktx).\\n\",\"2protein[Bxb1]+dna[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] <--> ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * protein_Bxb1^2 * dna_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_part_attL_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n Kr=k_reverse * ordered_polymer_part_t16_reverse_part_RFP_reverse_part_UTR1_reverse_part_attR_forward_part_pconst_reverse_complex_part_attL_protein_Bxb1_2x_reverse__part_UTR1_forward_part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=one_step_cooperative_binding, partid=Bxb1, name=ku).\\n\",\"rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[part[attB-reverse]:complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]]\\n Kf=k_forward * rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_Ribo\\n Kr=k_reverse * ordered_polymer_part_attB_reverse_complex_part_UTR1_protein_Ribo_forward__part_GFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=translation_mm, partid=UTR1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ku).\\n\",\"ordered_polymer[part[attB-reverse]:complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward]] --> rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[GFP]+protein[Ribo]\\n Kf=k_forward * ordered_polymer_part_attB_reverse_complex_part_UTR1_protein_Ribo_forward__part_GFP_forward_part_t16_forward_\\n  k_forward=0.2\\n  found_key=(mech=None, partid=None, name=ktl).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ktl).\\n\",\"rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[Ribo] <--> ordered_polymer[part[attR-reverse]:complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]]\\n Kf=k_forward * rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_Ribo\\n Kr=k_reverse * ordered_polymer_part_attR_reverse_complex_part_UTR1_protein_Ribo_forward__part_RFP_forward_part_t16_forward_\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=translation_mm, partid=UTR1, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ku).\\n\",\"ordered_polymer[part[attR-reverse]:complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward]] --> rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RFP]+protein[Ribo]\\n Kf=k_forward * ordered_polymer_part_attR_reverse_complex_part_UTR1_protein_Ribo_forward__part_RFP_forward_part_t16_forward_\\n  k_forward=0.2\\n  found_key=(mech=None, partid=None, name=ktl).\\n  search_key=(mech=translation_mm, partid=UTR1, name=ktl).\\n\",\"rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]]\\n Kf=k_forward * rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_ * protein_RNAase\\n Kr=k_reverse * complex_protein_RNAase_rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=ku).\\n\",\"complex[protein[RNAase]:rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]]] --> protein[RNAase]\\n Kf=k_forward * complex_protein_RNAase_rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward__\\n  k_forward=2\\n  found_key=(mech=None, partid=None, name=kdeg).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_attB_reverse_part_UTR1_forward_part_GFP_forward_part_t16_forward_, name=kdeg).\\n\",\"rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]+protein[RNAase] <--> complex[protein[RNAase]:rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]]\\n Kf=k_forward * rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_ * protein_RNAase\\n Kr=k_reverse * complex_protein_RNAase_rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward__\\n  k_forward=100\\n  found_key=(mech=None, partid=None, name=kb).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=kb).\\n  k_reverse=10\\n  found_key=(mech=None, partid=None, name=ku).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=ku).\\n\",\"complex[protein[RNAase]:rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]]] --> protein[RNAase]\\n Kf=k_forward * complex_protein_RNAase_rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward__\\n  k_forward=2\\n  found_key=(mech=None, partid=None, name=kdeg).\\n  search_key=(mech=rna_degradation_mm, partid=rna_part_attR_reverse_part_UTR1_forward_part_RFP_forward_part_t16_forward_, name=kdeg).\\n\"]],[\"type\",[\"<biocrnpyler.core.propensities.MassAction object at 0x1443ccfb0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443cd3a0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443cd580>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443ce8a0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443cf6e0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443ce510>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443cfce0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e1820>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e09b0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e1640>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e2a20>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e2e70>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e3560>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e3a40>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443e3c50>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f1580>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f21e0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f1a90>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f1be0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f2750>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f3a70>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f36b0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1443f3860>\",\"<biocrnpyler.core.propensities.MassAction object at 0x144429160>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14442a0c0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14442a810>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14442b2c0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14442b590>\",\"<biocrnpyler.core.propensities.MassAction object at 0x144468410>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14442acc0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x144469460>\",\"<biocrnpyler.core.propensities.MassAction object at 0x144469d00>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14446a2d0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14446aba0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14446b1a0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14446bd70>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14446a8d0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x14446bf20>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444a1880>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444a2330>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444a2ea0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444a30b0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444a2600>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444a3c50>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444d98e0>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444d9f10>\",\"<biocrnpyler.core.propensities.MassAction object at 0x1444daa80>\",\"<biocrnpyler.core.propensities.MassAction object at 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default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:part[attL-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:part[attR-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[attB-reverse]:complex[part[UTR1]:protein[Ribo]-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"protein[GFP in default.]\",\"ordered_polymer[part[attR-reverse]:complex[part[UTR1]:protein[Ribo]-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"protein[RFP in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-forward]:complex[part[attB]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[GFP-reverse]:part[UTR1-reverse]:complex[part[attL]:2x_protein[Bxb1]-forward]:part[pconst-forward]:part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attP]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attP-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:complex[part[pconst]:protein[RNAP]-reverse]:complex[part[attL]:2x_protein[Bxb1]-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"ordered_polymer[part[t16-reverse]:part[RFP-reverse]:part[UTR1-reverse]:complex[part[attR]:2x_protein[Bxb1]-forward]:part[pconst-reverse]:part[attL-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward] in default.]\",\"complex[protein[RNAase]:rna[part[attB-reverse]:part[UTR1-forward]:part[GFP-forward]:part[t16-forward]] in default.]\",\"complex[protein[RNAase]:rna[part[attR-reverse]:part[UTR1-forward]:part[RFP-forward]:part[t16-forward]] in default.]\"]],[\"type\",[\"nothing\",\"dna\",\"protein\",\"protein\",\"protein\",\"dna\",\"dna\",\"dna\",\"ordered_polymer\",\"rna\",\"ordered_polymer\",\"protein\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"rna\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"protein\",\"ordered_polymer\",\"protein\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"ordered_polymer\",\"complex\",\"complex\"]],[\"image\",[\"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\",null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null]],[\"color\",[\"purple\",\"white\",\"green\",\"green\",\"green\",\"white\",\"white\",\"white\",\"grey\",\"orange\",\"grey\",\"yellow\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"orange\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"lightgreen\",\"grey\",\"red\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"grey\",\"cyan\",\"cyan\"]],[\"index\",[0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56]]]}}},\"view\":{\"type\":\"object\",\"name\":\"CDSView\",\"id\":\"p1218\",\"attributes\":{\"filter\":{\"type\":\"object\",\"name\":\"AllIndices\",\"id\":\"p1219\"}}},\"glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1257\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":12},\"fill_color\":{\"type\":\"field\",\"field\":\"color\"}}},\"selection_glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1258\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":15},\"fill_color\":{\"type\":\"value\",\"value\":\"#fdae61\"}}},\"hover_glyph\":{\"type\":\"object\",\"name\":\"Scatter\",\"id\":\"p1259\",\"attributes\":{\"size\":{\"type\":\"value\",\"value\":15},\"fill_color\":{\"type\":\"value\",\"value\":\"#abdda4\"}}}}},\"edge_renderer\":{\"type\":\"object\",\"name\":\"GlyphRenderer\",\"id\":\"p1224\",\"attributes\":{\"data_source\":{\"type\":\"object\",\"name\":\"ColumnDataSource\",\"id\":\"p1221\",\"attributes\":{\"selected\":{\"type\":\"object\",\"name\":\"Selection\",\"id\":\"p1222\",\"attributes\":{\"indices\":[],\"line_indices\":[]}},\"selection_policy\":{\"type\":\"object\",\"name\":\"UnionRenderers\",\"id\":\"p1223\"},\"data\":{\"type\":\"map\",\"entries\":[[\"start\",[]],[\"end\",[]]]}}},\"view\":{\"type\":\"object\",\"name\":\"CDSView\",\"id\":\"p1225\",\"attributes\":{\"filter\":{\"type\":\"object\",\"name\":\"AllIndices\",\"id\":\"p1226\"}}},\"glyph\":{\"type\":\"object\",\"name\":\"MultiLine\",\"id\":\"p1220\"}}},\"selection_policy\":{\"type\":\"object\",\"name\":\"NodesOnly\",\"id\":\"p1227\"},\"inspection_policy\":{\"type\":\"object\",\"name\":\"NodesOnly\",\"id\":\"p1228\"}}}],\"toolbar\":{\"type\":\"object\",\"name\":\"Toolbar\",\"id\":\"p1193\",\"attributes\":{\"tools\":[{\"type\":\"object\",\"name\":\"HoverTool\",\"id\":\"p1260\",\"attributes\":{\"renderers\":[{\"id\":\"p1230\"}],\"tooltips\":null}},{\"type\":\"object\",\"name\":\"HoverTool\",\"id\":\"p1261\",\"attributes\":{\"renderers\":[{\"id\":\"p1212\"}],\"tooltips\":[[\"name\",\"@species\"],[\"type\",\"@type\"]],\"attachment\":\"right\"}},{\"type\":\"object\",\"name\":\"HoverTool\",\"id\":\"p1262\",\"attributes\":{\"renderers\":[{\"id\":\"p1194\"}],\"tooltips\":[[\"reaction\",\"@species\"],[\"type\",\"@type\"],[\"k_f\",\"@k\"],[\"k_r\",\"@k_r\"]],\"attachment\":\"right\"}},{\"type\":\"object\",\"name\":\"TapTool\",\"id\":\"p1263\",\"attributes\":{\"renderers\":\"auto\"}},{\"type\":\"object\",\"name\":\"BoxSelectTool\",\"id\":\"p1264\",\"attributes\":{\"renderers\":\"auto\",\"overlay\":{\"type\":\"object\",\"name\":\"BoxAnnotation\",\"id\":\"p1265\",\"attributes\":{\"syncable\":false,\"line_color\":\"black\",\"line_alpha\":1.0,\"line_width\":2,\"line_dash\":[4,4],\"fill_color\":\"lightgrey\",\"fill_alpha\":0.5,\"level\":\"overlay\",\"visible\":false,\"left\":{\"type\":\"number\",\"value\":\"nan\"},\"right\":{\"type\":\"number\",\"value\":\"nan\"},\"top\":{\"type\":\"number\",\"value\":\"nan\"},\"bottom\":{\"type\":\"number\",\"value\":\"nan\"},\"editable\":true,\"handles\":{\"type\":\"object\",\"name\":\"BoxInteractionHandles\",\"id\":\"p1271\",\"attributes\":{\"all\":{\"type\":\"object\",\"name\":\"AreaVisuals\",\"id\":\"p1270\",\"attributes\":{\"fill_color\":\"white\",\"hover_fill_color\":\"lightgray\"}}}}}}}},{\"type\":\"object\",\"name\":\"PanTool\",\"id\":\"p1272\"},{\"type\":\"object\",\"name\":\"WheelZoomTool\",\"id\":\"p1273\",\"attributes\":{\"renderers\":\"auto\"}}]}}}}]}};\n",
       "  const render_items = [{\"docid\":\"8995608f-836b-4849-acb0-0c214cecd19b\",\"roots\":{\"p1187\":\"fb6e6205-5de3-4af2-90d6-f42c133aa95d\"},\"root_ids\":[\"p1187\"]}];\n",
       "  void root.Bokeh.embed.embed_items_notebook(docs_json, render_items);\n",
       "  }\n",
       "  if (root.Bokeh !== undefined) {\n",
       "    embed_document(root);\n",
       "  } else {\n",
       "    let attempts = 0;\n",
       "    const timer = setInterval(function(root) {\n",
       "      if (root.Bokeh !== undefined) {\n",
       "        clearInterval(timer);\n",
       "        embed_document(root);\n",
       "      } else {\n",
       "        attempts++;\n",
       "        if (attempts > 100) {\n",
       "          clearInterval(timer);\n",
       "          console.log(\"Bokeh: ERROR: Unable to run BokehJS code because BokehJS library is missing\");\n",
       "        }\n",
       "      }\n",
       "    }, 10, root)\n",
       "  }\n",
       "})(window);"
      ],
      "application/vnd.bokehjs_exec.v0+json": ""
     },
     "metadata": {
      "application/vnd.bokehjs_exec.v0+json": {
       "id": "p1187"
      }
     },
     "output_type": "display_data"
    }
   ],
   "source": [
    "\n",
    "\n",
    "plotNetwork(myCRN,colordict={\"complex\":\"cyan\",\"protein\":\"green\",\n",
    "                        \"GFP\":\"lightgreen\",\n",
    "                        \"RFP\":\"red\",\n",
    "                        \"ribosome\":\"blue\",\n",
    "                        \"dna\":\"white\",\"rna\":\"orange\",\n",
    "                        \"ligand\":\"pink\",\"phosphate\":\"yellow\",\"nothing\":\"purple\", \"Bxb1\":\"yellow\"})"
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    "## Overview for developers\n",
    "Several key additions had to be made to biocrnpyler to make this possible. \n",
    "\n",
    "1. `Complex()` is a new function that you should use every time you want to make a ComplexSpecies. It should do exactly the same thing as the ComplexSpecies constructor, unless one of the species that you gave it is an OrderedComplexSpecies that has a 'bindloc' attribute, then instead of making a ComplexSpecies the function will make an OrderedComplexSpecies that is correctly formed.\n",
    "\n",
    "2. `OrderedPolymer` `OrderedMonomer` and `OrderedPolymerSpecies` are new data members that represent sequences of parts. A piece of DNA with many binding sites is represented as an OrderedPolymerSpecies. Because mechanisms and Components are agnostic of binding location; that is to say, they usually have code that looks like this: `make_complex([dna,protein])`, we must give them some way of knowing _where_ on that `dna` the `protein` should end up. To do this, you must pass an `OrderedMonomer` into a `Component` which belongs to an `OrderedPolymer`. Through the use of the `Complex()` function, the proper complex will be made, to the correct member of the `OrderedPolymer` which the `OrderedMonomer` belongs to.\n",
    "\n",
    "3. `DNA_part` inherits from `Component`, and every dna part such as `Promoter` now inherits from `DNA_part` instead of `Component`. This allows the storage of things like position, direction, and parent construct inside anything that used to be a `Component`\n",
    "\n",
    "4. `CDS` is a `DNA_part` which gives rise to a `Species`. It felt weird to put `Protein` objects into a DNA sequence so I created this. It only makes the protein if it is read in the 'forward' direction.\n",
    "\n",
    "4. `DNA_construct` contains a list of `DNA_part`s together with their directions. `DNA_construct` also has `update_species()` and `update_reactions()` so that it can generate the necessary species and reactions if it will be part of a CRN. Likewise, `RNA_construct` does the same thing for RNA. A `DNA_construct` can give rise to many `RNA_construct`s when it compiles. This is done through the action of `explore_txtl()`\n",
    "\n",
    "5. `explore_txtl()` is a function of `DNA_construct` which figures out the RNA and Proteins that a DNA produces. It works basically by going along a DNA part by part, remembering which parts came before, and taking into account the directions of parts. In general it will traverse a `DNA_construct` in the \"forward\" and \"reverse\" directions. It is hard coded to know that `RBS` parts make proteins and `Promoter` parts make RNAs, but only when their orientation is \"forward\" relative to the direction it's currently looking at. Other things are taken account too, for example, an `RBS` can only make a `Protein` if it is part of an RNA. Most of this logic is encapsulated in an object called `TxTl_explorer`.\n",
    "\n",
    "6. `update_components()` is a function of `DNA_construct` which creates many copies of the `DNA_part`s which make up the `DNA_construct`. This is necessary for making all combinatorial complexes. First, every `DNA_part` is fed in an `OrderedComplexSpecies` corresponding to the unbound DNA, which has the appropriate \"bindloc_\". Then, the `Species` produced by `update_species()` each have complexes in only one location. All possible combinations of bound species are then generated from this set of `OrderedComplexSpecies`. Then, these combinatorial complexes are fed _back_ into the `DNA_part`s, generating a new `DNA_part` that is responsible for generating species and reactions that include that combinatorial complex. For example, if you have  `DNA_construct` containing a `Promoter` and an `AttachmentSite`, then `update_components()` should generate two `Promoter` parts, one that has the unbound `OrderedComplexSpecies` and one that has an `OrderedComplexSpecies` that has integrases bound to it. Then, these new `Component`s can be used to make species and reactions using their respective `update_species()` and `update_reactions()`\n"
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